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L2_059_052G1_scaffold_406

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_406_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..588)
DNA (588bp) protein (196aa)
Putative ABC transporter, permease protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V180_CLOPF
Putative ABC transporter, permease protein {ECO:0000313|EMBL:EDT72417.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
ABC transporter permease
L2_059_052G1_scaffold_406_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(591..1658)
DNA (1068bp) protein (356aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium perfringens RepID=Q0SWJ1_CLOPS
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ABG86311.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_059_052G1_scaffold_406_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1927..2595
DNA (669bp) protein (223aa)
Nitroreductase family protein n=3 Tax=Clostridium perfringens RepID=B1BS14_CLOPF
Nitroreductase family protein {ECO:0000313|EMBL:EDT27292.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
nitroreductase
L2_059_052G1_scaffold_406_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2881..3546
DNA (666bp) protein (222aa)
nanE; N-acetylmannosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=7 Tax=Clostridium perfringens RepID=NANE_CLOP1
L2_059_052G1_scaffold_406_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3583..4449
DNA (867bp) protein (289aa)
nanA; N-acetylneuraminate lyase (EC:4.1.3.3)
N-acetylneuraminate lyase; Short=NAL;; Short=Neu5Ac lyase;; EC=4.1.3.3;; N-acetylneuraminate pyruvate-lyase; N-acetylneuraminic acid aldolase; Sialate lyase; Sialic acid aldolase; Sialic acid lyase; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
N-acetylneuraminate lyase n=7 Tax=Clostridium perfringens RepID=NANA_CLOP1
L2_059_052G1_scaffold_406_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4552..6069
DNA (1518bp) protein (506aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q8XNZ2_CLOPE
hypothetical protein
Sodium/solute symporter family protein {ECO:0000313|EMBL:EDS79687.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_059_052G1_scaffold_406_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6179..6631
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RR00_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15485.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_059_052G1_scaffold_406_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6787..7674
DNA (888bp) protein (296aa)
ROK family protein n=1 Tax=Clostridium perfringens F262 RepID=H7CRY6_CLOPF
ROK family protein {ECO:0000313|EMBL:EIA18626.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
ROK family protein
L2_059_052G1_scaffold_406_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7865..8704
DNA (840bp) protein (280aa)
Uncharacterized HTH-type transcriptional regulator CPE0189 n=9 Tax=Clostridium perfringens RepID=Y189_CLOPE
RpiR family transcriptional regulator
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EDT15444.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_059_052G1_scaffold_406_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8905..9339)
DNA (435bp) protein (145aa)
Uncharacterized protein CPE0190 n=3 Tax=Clostridium perfringens RepID=Y190_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18628.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_059_052G1_scaffold_406_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9557..14443
DNA (4887bp) protein (1629aa)
Hyaluronoglucosaminidase; Short=Hyaluronidase;; EC=3.2.1.35;; Mu toxin; Flags: Precursor;; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Hyaluronoglucosaminidase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=NAGH_CLOPE
nagH; hyaluronidase
L2_059_052G1_scaffold_406_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15318..16061
DNA (744bp) protein (248aa)
Cobalt transport protein CbiM n=8 Tax=Clostridium perfringens RepID=H7CRZ0_CLOPF
cbiM; cobalt transport protein CbiM
Cobalt transport protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Energy-coupling factor transporter probable substrate-capture protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Flags: Precursor;; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_052G1_scaffold_406_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16061..16372
DNA (312bp) protein (104aa)
Cobalt transport protein CbiN n=10 Tax=Clostridium perfringens RepID=CBIN_CLOPE
cbiN; cobalt transport protein CbiN
Cobalt transport protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; Energy-coupling factor transporter probable substrate-capture protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_059_052G1_scaffold_406_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16356..17126
DNA (771bp) protein (257aa)
Cobalt ABC transporter, permease protein CbiQ n=2 Tax=Clostridium perfringens RepID=H7CRZ2_CLOPF
Cobalt ABC transporter, permease protein CbiQ {ECO:0000313|EMBL:EIA18632.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
cbiQ; cobalt ABC transporter permease CbiQ
L2_059_052G1_scaffold_406_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17141..17998
DNA (858bp) protein (286aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RF97_CLOPF
cbiO; cobalt transporter ATP-binding subunit
L2_059_052G1_scaffold_406_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18460..20043
DNA (1584bp) protein (528aa)
Pts system maltose-specific eiicb component {ECO:0000313|EMBL:EDT27289.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDT27289.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Pts system maltose-specific eiicb component n=2 Tax=Clostridium perfringens RepID=B1RF96_CLOPF
ptiB; PTS system arbutin-like transporter subunit IIBC
L2_059_052G1_scaffold_406_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20298..21068
DNA (771bp) protein (257aa)
Transcriptional regulator, RpiR family n=4 Tax=Clostridium perfringens RepID=B1BS00_CLOPF
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EDT15474.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L2_059_052G1_scaffold_406_18
unknown

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21111..21215
DNA (105bp) protein (35aa)

This feature has no annotations

L2_059_052G1_scaffold_406_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21397..21897
DNA (501bp) protein (167aa)
Putative SIS domain n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V163_CLOPF
Putative SIS domain {ECO:0000313|EMBL:EDT72445.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L2_059_052G1_scaffold_406_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22153..23478
DNA (1326bp) protein (442aa)
Maltose-6'-phosphate glucosidase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNY3_CLOPE
malH; maltose-6'-phosphate glucosidase
Maltose-6'-phosphate glucosidase {ECO:0000313|EMBL:BAB79905.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_052G1_scaffold_406_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24023..24220
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q0SWH8_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15497.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_059_052G1_scaffold_406_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24426..25289)
DNA (864bp) protein (288aa)
Probable acid phosphatase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNY1_CLOPE
5'-nucleotidase
Probable acid phosphatase {ECO:0000313|EMBL:BAB79907.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_052G1_scaffold_406_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25648..26604)
DNA (957bp) protein (319aa)
Peptidase, M23/M37 family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BKN5_CLOPF
Peptidase, M23/M37 family {ECO:0000313|EMBL:EDS79649.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
M24/M37 family peptidase
Displaying 23 items

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