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L2_059_052G1_scaffold_431

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_431_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2..508)
DNA (507bp) protein (169aa)
cobD; putative threonine-phosphate decarboxylase (EC:4.1.1.81)
UPI0003D66E3B related cluster n=1 Tax=unknown RepID=UPI0003D66E3B
Uncharacterized protein {ECO:0000313|EMBL:ETI84689.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L2_059_052G1_scaffold_431_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(492..1361)
DNA (870bp) protein (290aa)
UPI0003D63706 related cluster n=1 Tax=unknown RepID=UPI0003D63706
GHMP kinase {ECO:0000313|EMBL:ETI84690.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
GHMP kinase
L2_059_052G1_scaffold_431_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1346..2098)
DNA (753bp) protein (251aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D629B8 related cluster n=1 Tax=unknown RepID=UPI0003D629B8
cobalamin synthase
L2_059_052G1_scaffold_431_4
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2095..3060)
DNA (966bp) protein (322aa)
UPI0003D64D99 related cluster n=1 Tax=unknown RepID=UPI0003D64D99
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
cobalamin biosynthesis protein CobD
L2_059_052G1_scaffold_431_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3057..4601)
DNA (1545bp) protein (515aa)
UPI0003D5F7BA related cluster n=1 Tax=unknown RepID=UPI0003D5F7BA
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
Cobyric acid synthase
L2_059_052G1_scaffold_431_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4611..5186)
DNA (576bp) protein (192aa)
cobU; putative adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase (EC:2.7.1.156 2.7.7.62)
UPI0003D617A2 related cluster n=1 Tax=unknown RepID=UPI0003D617A2
Adenosylcobalamin biosynthesis protein CobU {ECO:0000313|EMBL:ETI84694.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L2_059_052G1_scaffold_431_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5261..5599
DNA (339bp) protein (113aa)
UPI0003D63647 related cluster n=1 Tax=unknown RepID=UPI0003D63647
Uncharacterized protein {ECO:0000313|EMBL:ETI84695.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L2_059_052G1_scaffold_431_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5663..6172)
DNA (510bp) protein (170aa)
UPI0003D5965D related cluster n=1 Tax=unknown RepID=UPI0003D5965D
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:ETI84696.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ATP/cobalamin adenosyltransferase
L2_059_052G1_scaffold_431_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6183..6587)
DNA (405bp) protein (135aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5DE47 related cluster n=1 Tax=unknown RepID=UPI0003D5DE47
nucleoside diphosphate kinase
L2_059_052G1_scaffold_431_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6802..7719)
DNA (918bp) protein (306aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5A088 related cluster n=1 Tax=unknown RepID=UPI0003D5A088
Homoserine kinase
L2_059_052G1_scaffold_431_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7706..9016)
DNA (1311bp) protein (437aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D59793 related cluster n=1 Tax=unknown RepID=UPI0003D59793
homoserine dehydrogenase
L2_059_052G1_scaffold_431_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9027..9476)
DNA (450bp) protein (150aa)
UPI0003D59C37 related cluster n=1 Tax=unknown RepID=UPI0003D59C37
UPF0735 ACT domain-containing protein Q612_NSC00160G0001 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
amino acid-binding ACT protein
L2_059_052G1_scaffold_431_13
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9483..10505)
DNA (1023bp) protein (341aa)
UPI0003D5D6FF related cluster n=1 Tax=unknown RepID=UPI0003D5D6FF
Uncharacterized protein {ECO:0000313|EMBL:KGF12568.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein
L2_059_052G1_scaffold_431_14
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10502..11353)
DNA (852bp) protein (284aa)
UPI0003D5FD89 related cluster n=1 Tax=unknown RepID=UPI0003D5FD89
Uncharacterized protein {ECO:0000313|EMBL:ETI85873.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L2_059_052G1_scaffold_431_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11363..12301)
DNA (939bp) protein (313aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D632B1 related cluster n=1 Tax=unknown RepID=UPI0003D632B1
ribonuclease HIII
L2_059_052G1_scaffold_431_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12291..12725)
DNA (435bp) protein (145aa)
UPI0003D68975 related cluster n=1 Tax=unknown RepID=UPI0003D68975
Uncharacterized protein {ECO:0000313|EMBL:ETI85875.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L2_059_052G1_scaffold_431_17
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12722..13480)
DNA (759bp) protein (253aa)
UPI0003D6292B related cluster n=1 Tax=unknown RepID=UPI0003D6292B
Uncharacterized protein {ECO:0000313|EMBL:KGF12565.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
phosphoribosylaminoimidazole carboxylase catalytic subunit
L2_059_052G1_scaffold_431_18
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13437..14264)
DNA (828bp) protein (276aa)
UPI0003D5BD26 related cluster n=1 Tax=unknown RepID=UPI0003D5BD26
TRNA/rRNA methyltransferase SpoU {ECO:0000313|EMBL:ETI85878.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
tRNA/rRNA methyltransferase (SpoU)
L2_059_052G1_scaffold_431_19
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14261..15997)
DNA (1737bp) protein (579aa)
UPI0003D59681 related cluster n=1 Tax=unknown RepID=UPI0003D59681
ABC transporter related protein {ECO:0000313|EMBL:ETI85879.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ABC transporter
L2_059_052G1_scaffold_431_20
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16001..17731)
DNA (1731bp) protein (577aa)
UPI0003D60FA9 related cluster n=1 Tax=unknown RepID=UPI0003D60FA9
ABC transporter related protein {ECO:0000313|EMBL:ETI85880.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ABC transporter
L2_059_052G1_scaffold_431_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17821..19725)
DNA (1905bp) protein (635aa)
UPI0003D67B30 related cluster n=1 Tax=unknown RepID=UPI0003D67B30
Glutamate-ammonia ligase, catalytic protein {ECO:0000313|EMBL:ETI85881.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
glutamine synthetase
L2_059_052G1_scaffold_431_22
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19792..20247)
DNA (456bp) protein (152aa)
UPI0003D5C707 related cluster n=1 Tax=unknown RepID=UPI0003D5C707
YqeY-like protein {ECO:0000313|EMBL:ETI85882.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L2_059_052G1_scaffold_431_23
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20265..20441)
DNA (177bp) protein (59aa)
UPI0003D628EC related cluster n=1 Tax=unknown RepID=UPI0003D628EC
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
30S ribosomal protein S21
L2_059_052G1_scaffold_431_24
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20518..20871)
DNA (354bp) protein (118aa)
UPI0003D67CE1 related cluster n=1 Tax=unknown RepID=UPI0003D67CE1
Histidine triad protein {ECO:0000313|EMBL:ETI85884.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
HIT family protein
L2_059_052G1_scaffold_431_25
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20874..22184)
DNA (1311bp) protein (437aa)
UPI0003D5DA2D related cluster n=1 Tax=unknown RepID=UPI0003D5DA2D
MiaB-like protein {ECO:0000313|EMBL:ETI85885.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
MiaB-like tRNA modifying enzyme
L2_059_052G1_scaffold_431_26
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22285..23439)
DNA (1155bp) protein (385aa)
UPI0003D633CA related cluster n=1 Tax=unknown RepID=UPI0003D633CA
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
chaperone protein DnaJ
L2_059_052G1_scaffold_431_27
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23458..24513)
DNA (1056bp) protein (352aa)
UPI0003D65B4D related cluster n=1 Tax=unknown RepID=UPI0003D65B4D
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
molecular chaperone DnaK
Displaying 27 items

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