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L2_059_052G1_scaffold_444

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_444_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..369
DNA (369bp) protein (123aa)
Succinate dehydrogenase {ECO:0000313|EMBL:KJC10836.1}; EC=1.3.5.1 {ECO:0000313|EMBL:KJC10836.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
sdhC; succinate dehydrogenase (EC:1.3.5.1)
Succinate dehydrogenase cytochrome b556 subunit n=8 Tax=Citrobacter RepID=C1M906_9ENTR
L2_059_052G1_scaffold_444_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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363..710
DNA (348bp) protein (116aa)
sdhD; succinate dehydrogenase (EC:1.3.5.1)
Succinate dehydrogenase hydrophobic membrane anchor protein n=5 Tax=Citrobacter RepID=J0M2L8_9ENTR
Succinate dehydrogenase hydrophobic membrane anchor subunit {ECO:0000313|EMBL:ETX72775.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_059_052G1_scaffold_444_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

710..1630
DNA (921bp) protein (307aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Succinate dehydrogenase, flavoprotein subunit n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BC98_9ENTR
sdhA; succinate dehydrogenase
L2_059_052G1_scaffold_444_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1617..2366
DNA (750bp) protein (250aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
Succinate dehydrogenase flavoprotein subunit n=2 Tax=Citrobacter RepID=C1M908_9ENTR
sdhA; succinate dehydrogenase
L2_059_052G1_scaffold_444_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2382..3098
DNA (717bp) protein (239aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Shigella flexneri 1235-66 RepID=I6HDR5_SHIFL
sdhB; succinate dehydrogenase
L2_059_052G1_scaffold_444_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3502..6303
DNA (2802bp) protein (934aa)
Alpha-ketoglutarate decarboxylase n=5 Tax=Citrobacter RepID=J0M9D3_9ENTR
2-oxoglutarate dehydrogenase {ECO:0000313|EMBL:KJC08364.1}; 2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:BAO18614.1}; Flags: Fragment;; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
2-oxoglutarate dehydrogenase
L2_059_052G1_scaffold_444_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6318..7541
DNA (1224bp) protein (408aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
dihydrolipoamide succinyltransferase (EC:2.3.1.61)
Dihydrolipoamide acetyltransferase n=8 Tax=Citrobacter RepID=J1G6H2_9ENTR
L2_059_052G1_scaffold_444_8
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7632..8798
DNA (1167bp) protein (389aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=11 Tax=Enterobacteriaceae RepID=C1M912_9ENTR
L2_059_052G1_scaffold_444_9
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8798..9667
DNA (870bp) protein (290aa)
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=11 Tax=Citrobacter RepID=C1M913_9ENTR
L2_059_052G1_scaffold_444_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9893..10783
DNA (891bp) protein (297aa)
Transcriptional regulator n=3 Tax=Citrobacter RepID=J0VVB8_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:KJC08360.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulator
L2_059_052G1_scaffold_444_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10762..11550)
DNA (789bp) protein (263aa)
Uroporphyrin-III methyltransferase {ECO:0000313|EMBL:KJC10845.1}; EC=2.1.1.107 {ECO:0000313|EMBL:KJC10845.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
uroporphyrin-III methyltransferase (EC:2.1.1.107)
Uroporphyrin-III C-methyltransferase n=2 Tax=Citrobacter freundii RepID=K8QVF7_CITFR
L2_059_052G1_scaffold_444_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11956..12858
DNA (903bp) protein (301aa)
Glycine cleavage system transcriptional activator n=6 Tax=Citrobacter RepID=J1G6H5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX65244.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
LysR family transcriptional regulator
L2_059_052G1_scaffold_444_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12941..13543)
DNA (603bp) protein (201aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:KEL77512.1}; EC=2.5.1.17 {ECO:0000313|EMBL:KEL77512.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase (EC:2.5.1.17)
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=3 Tax=Citrobacter RepID=J0M2M5_9ENTR
L2_059_052G1_scaffold_444_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13553..15205)
DNA (1653bp) protein (551aa)
Fumarate hydratase n=2 Tax=Citrobacter RepID=K8QYV4_CITFR
Fumarate hydratase {ECO:0000313|EMBL:KJC08356.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
fumarate hydratase
L2_059_052G1_scaffold_444_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15266..16267)
DNA (1002bp) protein (334aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
glutaminase (EC:3.5.1.2)
Glutaminase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UYB9_9ENTR
L2_059_052G1_scaffold_444_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16362..17666)
DNA (1305bp) protein (435aa)
Proton sodium-glutamate symport protein n=5 Tax=Citrobacter RepID=J0M9E3_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX72788.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
C4-dicarboxylate ABC transporter
L2_059_052G1_scaffold_444_17
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17835..18152)
DNA (318bp) protein (106aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=J1G6H8_9ENTR
acyl-CoA synthetase
Uncharacterized protein {ECO:0000313|EMBL:GAL44836.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_059_052G1_scaffold_444_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18149..19519)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=6 Tax=Citrobacter RepID=C1M930_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEL77507.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
3-methylaspartate ammonia-lyase
L2_059_052G1_scaffold_444_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19523..20764)
DNA (1242bp) protein (414aa)
Methylaspartate ammonia-lyase n=6 Tax=Citrobacter RepID=J1G6P0_9ENTR
Methylaspartate ammonia-lyase {ECO:0000313|EMBL:KJC10853.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
methylaspartate ammonia-lyase
L2_059_052G1_scaffold_444_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20764..22209)
DNA (1446bp) protein (482aa)
Glutamate mutase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_01923}; EC=5.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01923};; Glutamate mutase E chain {ECO:0000256|HAMAP-Rule:MF_01923}; Glutamate mutase large subunit {ECO:0000256|HAMAP-Rule:MF_01923}; Methylaspartate mutase {ECO:0000256|HAMAP-Rule:MF_01923}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Methylaspartate e subunit n=6 Tax=Citrobacter RepID=J0VVC3_9ENTR
glutamate mutase
L2_059_052G1_scaffold_444_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22228..23616)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=K8QVE7_CITFR
Glutamate mutase {ECO:0000313|EMBL:KJC10855.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
glutamate mutase
L2_059_052G1_scaffold_444_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23616..24065)
DNA (450bp) protein (150aa)
Glutamate mutase sigma subunit {ECO:0000256|HAMAP-Rule:MF_00526}; EC=5.4.99.1 {ECO:0000256|HAMAP-Rule:MF_00526};; Glutamate mutase S chain {ECO:0000256|HAMAP-Rule:MF_00526}; Glutamate mutase small subunit {ECO:0000256|HAMAP-Rule:MF_00526}; Methylaspartate mutase {ECO:0000256|HAMAP-Rule:MF_00526}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
Methylaspartate mutase S chain n=8 Tax=Citrobacter RepID=C1M934_9ENTR
methylaspartate mutase
Displaying 22 items

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