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L2_059_052G1_scaffold_516

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_516_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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65..574
DNA (510bp) protein (170aa)
Glucose-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:KEL78575.1}; EC=2.7.1.- {ECO:0000313|EMBL:KEL78575.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Glucose-specific phosphotransferase enzyme IIA component n=692 Tax=Bacteria RepID=PTGA_SALTI
PTS system glucose-specific transporter subunit IIA
L2_059_052G1_scaffold_516_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(709..948)
DNA (240bp) protein (80aa)
Cytoplasmic protein n=6 Tax=Citrobacter RepID=J0M4G2_9ENTR
Cytoplasmic protein {ECO:0000313|EMBL:KJC04900.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_052G1_scaffold_516_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(945..1811)
DNA (867bp) protein (289aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
pdxK; pyridoxal kinase (EC:2.7.1.35)
Pyridoxal kinase n=4 Tax=Citrobacter RepID=J1G876_9ENTR
L2_059_052G1_scaffold_516_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1894..3186
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UR58_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:KJC07918.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulator
L2_059_052G1_scaffold_516_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3200..3916
DNA (717bp) protein (239aa)
glutamine amidotransferase (EC:6.3.5.2)
Glutamine amidotransferase n=3 Tax=Citrobacter RepID=K8QQU1_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL78579.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
L2_059_052G1_scaffold_516_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4008..4919)
DNA (912bp) protein (304aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
cysM; cysteine synthase (EC:2.5.1.47)
Cysteine synthase B n=3 Tax=Citrobacter RepID=K8QSR1_CITFR
L2_059_052G1_scaffold_516_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5039..6136)
DNA (1098bp) protein (366aa)
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701};; Sulfate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01701}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Sulfate/thiosulfate transporter subunit n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DGZ6_CITFR
sulfate/thiosulfate transporter subunit
L2_059_052G1_scaffold_516_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6126..7001)
DNA (876bp) protein (292aa)
Sulfate transport system permease CysW n=7 Tax=Citrobacter RepID=C1M7R3_9ENTR
Sulfate transport system permease CysW {ECO:0000313|EMBL:ETX62583.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
cysW; sulfate/thiosulfate transporter permease subunit
L2_059_052G1_scaffold_516_9
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7001..7834)
DNA (834bp) protein (278aa)
Sulfate transport system permease CysT n=10 Tax=Enterobacteriaceae RepID=G9SMC1_CITFR
Sulfate ABC transporter, permease protein CysT {ECO:0000313|EMBL:EIQ79287.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
sulfate/thiosulfate transporter subunit
L2_059_052G1_scaffold_516_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7835..8851)
DNA (1017bp) protein (339aa)
Sulfate and thiosulfate binding protein CysP n=6 Tax=Citrobacter RepID=J0VX33_9ENTR
Thiosulfate-binding protein {ECO:0000313|EMBL:ETX69769.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
cysP; thiosulfate transporter subunit
L2_059_052G1_scaffold_516_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9009..9800)
DNA (792bp) protein (264aa)
Oxidoreductase ucpA {ECO:0000313|EMBL:KEL78585.1}; EC=1.-.-.- {ECO:0000313|EMBL:KEL78585.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Short chain dehydrogenase n=5 Tax=Citrobacter RepID=J1G8H4_9ENTR
short-chain dehydrogenase
L2_059_052G1_scaffold_516_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9973..10872)
DNA (900bp) protein (300aa)
Dyp-type peroxidase family protein n=3 Tax=Enterobacteriaceae RepID=I6HEU2_SHIFL
Iron-dependent peroxidase {ECO:0000313|EMBL:ETX69771.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
peroxidase
L2_059_052G1_scaffold_516_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10966..11541)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QUB2_CITFR
RpoE-regulated lipoprotein {ECO:0000313|EMBL:KJC07927.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
RpoE-regulated lipoprotein
L2_059_052G1_scaffold_516_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11601..12050)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BA81_CITFR
Inner membrane protein yfeZ {ECO:0000313|EMBL:KEL78588.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
membrane protein
L2_059_052G1_scaffold_516_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12037..12462)
DNA (426bp) protein (142aa)
Acetyltransferase YpeA {ECO:0000256|HAMAP-Rule:MF_01127}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01127};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Acetyltransferase CSAG_02239 n=11 Tax=Enterobacteriaceae RepID=C1M7S0_9ENTR
acetyltransferase
L2_059_052G1_scaffold_516_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12674..13543
DNA (870bp) protein (290aa)
N-acetylmuramoyl-L-alanine amidase AmiA n=8 Tax=Citrobacter RepID=C1M7S1_9ENTR
N-acetylmuramoyl-L-alanine amidase AmiA {ECO:0000313|EMBL:ETX69775.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
N-acetylmuramoyl-l-alanine amidase I
L2_059_052G1_scaffold_516_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13546..14445
DNA (900bp) protein (300aa)
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
coproporphyrinogen III oxidase (EC:1.3.3.3)
Coproporphyrinogen-III oxidase, aerobic n=2 Tax=Citrobacter freundii RepID=K8QYW9_CITFR
L2_059_052G1_scaffold_516_18
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14514..15215)
DNA (702bp) protein (234aa)
Uncharacterized protein n=6 Tax=Salmonella enterica I RepID=B5Q1S4_SALVI
Uncharacterized protein {ECO:0000313|EMBL:EDZ04922.1}; TaxID=465517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Virchow str. SL491.;"
L2_059_052G1_scaffold_516_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15360..16412)
DNA (1053bp) protein (351aa)
HTH-type transcriptional regulator eutR n=6 Tax=Citrobacter RepID=J1G863_9ENTR
Ethanolamine operon regulatory protein {ECO:0000313|EMBL:CDL36624.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
transcriptional regulator EutR
L2_059_052G1_scaffold_516_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16461..17006)
DNA (546bp) protein (182aa)
Carboxysome structural protein EutK n=3 Tax=Citrobacter RepID=K8R2Q7_CITFR
Ethanolamine utilization polyhedral-body-like protein EutK {ECO:0000313|EMBL:CDL36625.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
carboxysome structural protein EutK
L2_059_052G1_scaffold_516_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17018..17677)
DNA (660bp) protein (220aa)
Ethanolamine utilization protein EutL n=4 Tax=Citrobacter RepID=C1M7S5_9ENTR
ethanolamine utilization protein EutL
Ethanolamine utilization protein EutL {ECO:0000313|EMBL:KJC04918.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
L2_059_052G1_scaffold_516_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17687..18577)
DNA (891bp) protein (297aa)
Ethanolamine ammonia-lyase light chain {ECO:0000256|HAMAP-Rule:MF_00601, ECO:0000256|SAAS:SAAS00064961}; EC=4.3.1.7 {ECO:0000256|HAMAP-Rule:MF_00601, ECO:0000256|SAAS:SAAS00064958};; Ethanolamine ammonia-lyase small subunit {ECO:0000256|HAMAP-Rule:MF_00601}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
ethanolamine ammonia-lyase (EC:4.3.1.7)
Ethanolamine ammonia-lyase light chain n=5 Tax=Citrobacter RepID=J1G8G5_9ENTR
L2_059_052G1_scaffold_516_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18598..19959)
DNA (1362bp) protein (454aa)
Ethanolamine ammonia-lyase heavy chain n=9 Tax=Citrobacter RepID=C1M7S7_9ENTR
ethanolamine ammonia-lyase
Ethanolamine ammonia-lyase heavy chain {ECO:0000313|EMBL:ETX62597.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
Displaying 23 items

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