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L2_059_052G1_scaffold_570

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_570_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..290)
DNA (288bp) protein (96aa)
Amidohydrolase-like protein n=1 Tax=Clostridium perfringens F262 RepID=H7CZG0_CLOPF
amidohydrolase
Amidohydrolase homolog {ECO:0000313|EMBL:EDT14404.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_059_052G1_scaffold_570_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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446..622
DNA (177bp) protein (59aa)
Probable sigma-F transcribed protein n=10 Tax=Clostridium perfringens RepID=Q8XHM9_CLOPE
putative csfB protein
Putative csfB protein {ECO:0000313|EMBL:EDT26017.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_059_052G1_scaffold_570_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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640..2070
DNA (1431bp) protein (477aa)
Orn/Lys/Arg decarboxylase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R9Y6_CLOPF
Orn/Lys/Arg decarboxylase {ECO:0000313|EMBL:EDT22926.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Orn/Lys/Arg decarboxylase
L2_059_052G1_scaffold_570_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2316..2906
DNA (591bp) protein (197aa)
Guanylate kinase, homolog n=2 Tax=Clostridium perfringens RepID=Q0TMK0_CLOP1
guanylate kinase
Guanylate kinase, homolog {ECO:0000313|EMBL:EDT22948.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_059_052G1_scaffold_570_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2923..3078
DNA (156bp) protein (52aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CZF6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26018.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_059_052G1_scaffold_570_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3235..3564
DNA (330bp) protein (110aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CZF5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82156.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_052G1_scaffold_570_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3586..4509
DNA (924bp) protein (308aa)
holB; DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III delta' subunit n=5 Tax=Clostridium perfringens RepID=Q8XHN4_CLOPE
DNA polymerase III delta' subunit {ECO:0000313|EMBL:BAB82155.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_052G1_scaffold_570_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4512..5417
DNA (906bp) protein (302aa)
PSP1 domain-containing protein n=10 Tax=Clostridium perfringens RepID=H7CZF3_CLOPF
PSP1 domain-containing protein
Signal peptidase-like protein {ECO:0000313|EMBL:BAB82154.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_052G1_scaffold_570_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5586..5756
DNA (171bp) protein (57aa)
Ferredoxin n=11 Tax=Clostridium perfringens RepID=FER_CLOPE
ferredoxin (fdxA)
Putative ferredoxin {ECO:0000313|EMBL:ABG86239.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_059_052G1_scaffold_570_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5873..7555
DNA (1683bp) protein (561aa)
Mur ligase family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TMK6_CLOP1
Mur ligase
Mur ligase family protein {ECO:0000313|EMBL:EDT26000.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_059_052G1_scaffold_570_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7606..8259)
DNA (654bp) protein (218aa)
Putative zinc-dependent hydrolase n=2 Tax=Clostridium perfringens RepID=Q0TMK7_CLOP1
zinc-dependent hydrolase
Putative zinc-dependent hydrolase {ECO:0000313|EMBL:EDT71222.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_059_052G1_scaffold_570_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8476..8931
DNA (456bp) protein (152aa)
Transcriptional regulator CtsR n=10 Tax=Clostridium perfringens RepID=H7CZE9_CLOPF
transcriptional repressor
Transcriptional repressor of class III stress genes {ECO:0000313|EMBL:BAB82150.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_052G1_scaffold_570_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8951..9478
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CZE8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA15956.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_059_052G1_scaffold_570_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9462..10475
DNA (1014bp) protein (338aa)
Protein-arginine kinase {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166216}; EC=2.7.14.1 {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166206};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Putative ATP:guanido phosphotransferase HMPREF9476_02490 n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CVB9_CLOPF
ATP:guanido phosphotransferase
L2_059_052G1_scaffold_570_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10500..12950
DNA (2451bp) protein (817aa)
clpC; negative regulator of genetic competence MecB/ClpC (EC:3.4.21.-)
Negative regulator of genetic competence MecB/ClpC {ECO:0000313|EMBL:EDT22945.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDT22945.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Negative regulator of genetic competence MecB/ClpC n=2 Tax=Clostridium perfringens RepID=Q0TML1_CLOP1
L2_059_052G1_scaffold_570_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13220..14158
DNA (939bp) protein (313aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Thioredoxin reductase n=10 Tax=Clostridium perfringens RepID=H7CZE5_CLOPF
thioredoxin-disulfide reductase
L2_059_052G1_scaffold_570_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14161..14394
DNA (234bp) protein (78aa)
YruB family glutaredoxin-like protein n=11 Tax=Clostridium perfringens RepID=H7CZE4_CLOPF
YruB family glutaredoxin-like protein
Glutaredoxin-like protein, YruB-family {ECO:0000313|EMBL:EDT26005.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_059_052G1_scaffold_570_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14411..15859
DNA (1449bp) protein (483aa)
NADP-dependent glyceraldehyde-3-phosphate dehydrogenas n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHP4_CLOPE
gapN; NADP-dependent glyceraldehyde-3-phosphate dehydrogenas
NADP-dependent glyceraldehyde-3-phosphate dehydrogenas {ECO:0000313|EMBL:BAB82144.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_052G1_scaffold_570_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15982..16209)
DNA (228bp) protein (76aa)
YruB family glutaredoxin-like protein n=10 Tax=Clostridium perfringens RepID=H7CZE2_CLOPF
glutaredoxin
Glutaredoxin-like protein, YruB-family {ECO:0000313|EMBL:EDT14437.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_059_052G1_scaffold_570_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16667..17395
DNA (729bp) protein (243aa)
GntR family transcriptional regulator n=4 Tax=Clostridium perfringens RepID=H7CZE0_CLOPF
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDT25996.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_059_052G1_scaffold_570_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17386..17604
DNA (219bp) protein (73aa)
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase {ECO:0000255|HAMAP-Rule:MF_01241}; EC=3.5.99.6 {ECO:0000255|HAMAP-Rule:MF_01241};; GlcN6P deaminase {ECO:0000255|HAMAP-Rule:MF_01241}; Short=GNPDA {ECO:0000255|HAMAP-Rule:MF_01241};; Glucosamine-6-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_01241}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Glucosamine-6-phosphate deaminase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJ55_CLOPF
Displaying 21 items

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