ggKbase home page

L2_059_052G1_scaffold_605

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_605_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..914
DNA (912bp) protein (304aa)
Type VI secretion system secreted protein VgrG n=5 Tax=Escherichia coli RepID=T5PSG3_ECOLX
hypothetical protein
Type VI secretion system Vgr family protein {ECO:0000313|EMBL:EOW98293.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L2_059_052G1_scaffold_605_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

904..1695
DNA (792bp) protein (264aa)
Zinc-dependent metallopeptidase n=2 Tax=Escherichia coli RepID=L5CIS6_ECOLX
putative zinc-dependent metallopeptidase
Uncharacterized protein {ECO:0000313|EMBL:EZJ52165.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
L2_059_052G1_scaffold_605_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1719..2540
DNA (822bp) protein (274aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=L2WR39_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESD32088.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L2_059_052G1_scaffold_605_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2839..3054
DNA (216bp) protein (72aa)
Uncharacterized protein n=286 Tax=Escherichia RepID=B7MMU5_ECO45
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKI15016.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_059_052G1_scaffold_605_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3371..3940)
DNA (570bp) protein (190aa)
Uncharacterized protein yddH n=279 Tax=Escherichia RepID=E2QM18_ECOLX
yddH; hypothetical protein
Flavin reductase like domain protein {ECO:0000313|EMBL:EZJ52169.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
L2_059_052G1_scaffold_605_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4115..4960
DNA (846bp) protein (282aa)
nhoA; N-hydroxyarylamine O-acetyltransferase (EC:2.3.1.118)
N-hydroxyarylamine O-acetyltransferase {ECO:0000313|EMBL:CAR07813.2}; EC=2.3.1.118 {ECO:0000313|EMBL:CAR07813.2};; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
N-hydroxyarylamine O-acetyltransferase n=265 Tax=Escherichia RepID=E2QM19_ECOLX
L2_059_052G1_scaffold_605_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5056..5949)
DNA (894bp) protein (298aa)
Uncharacterized isomerase yddE n=52 Tax=Escherichia coli RepID=E2QM20_ECOLX
yddE; isomerase yddE
Phenazine biosynthesis protein, PhzF family {ECO:0000313|EMBL:ESD32093.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L2_059_052G1_scaffold_605_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6029..6709)
DNA (681bp) protein (227aa)
Respiratory nitrate reductase, gamma subunit {ECO:0000313|EMBL:EHU29257.1}; EC=1.7.99.4 {ECO:0000313|EMBL:EHU29257.1};; TaxID=868137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1E.;"
Respiratory nitrate reductase 2 gamma chain n=122 Tax=Escherichia RepID=E2QM21_ECOLX
cryptic nitrate reductase 2 gamma subunit
L2_059_052G1_scaffold_605_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6706..7401)
DNA (696bp) protein (232aa)
Respiratory nitrate reductase 2 delta chain n=25 Tax=Escherichia coli RepID=E2QM22_ECOLX
nitrate reductase 2 (NRZ), delta subunit (assembly subunit)
Nitrate reductase {ECO:0000313|EMBL:AIX63271.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_059_052G1_scaffold_605_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7401..8945)
DNA (1545bp) protein (515aa)
Nitrate reductase, beta subunit {ECO:0000313|EMBL:KEJ59994.1}; EC=1.7.99.4 {ECO:0000313|EMBL:KEJ59994.1};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Respiratory nitrate reductase 2 beta chain n=105 Tax=Escherichia coli RepID=E2QM23_ECOLX
nitrate reductase 2 (NRZ), beta subunit
L2_059_052G1_scaffold_605_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8942..12682)
DNA (3741bp) protein (1247aa)
Respiratory nitrate reductase 2 alpha chain n=24 Tax=Escherichia coli RepID=E2QM24_ECOLX
narZ; Respiratory nitrate reductase 2 alpha chain
Respiratory nitrate reductase 2 alpha chain {ECO:0000313|EMBL:EQX28176.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L2_059_052G1_scaffold_605_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12777..14165)
DNA (1389bp) protein (463aa)
Nitrite extrusion protein 2 n=262 Tax=Escherichia RepID=E2QM25_ECOLX
narU; nitrite extrusion protein 2
Nitrite extrusion protein 2 {ECO:0000313|EMBL:EOU79769.1}; TaxID=1169343 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE24.;"
L2_059_052G1_scaffold_605_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14438..15262)
DNA (825bp) protein (275aa)
Uncharacterized protein n=477 Tax=Enterobacteriaceae RepID=B6IAM4_ECOSE
yddG; hypothetical protein
YddG protein {ECO:0000313|EMBL:CAU97459.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain 55989 / EAEC).;"
L2_059_052G1_scaffold_605_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15552..16139
DNA (588bp) protein (196aa)
formate dehydrogenase, subunit alpha (EC:1.7.99.4)
Formate dehydrogenase, nitrate-inducible, major subunit {ECO:0000313|EMBL:EFK01325.1}; EC=1.2.1.2 {ECO:0000313|EMBL:EFK01325.1};; TaxID=749545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 182-1.;"
Formate dehydrogenase-N, alpha subunit, nitrate-inducible n=9 Tax=Escherichia RepID=B7LQW5_ESCF3
L2_059_052G1_scaffold_605_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16188..18509
DNA (2322bp) protein (774aa)
fdnG; formate dehydrogenase-N subunit alpha, nitrate-inducible (EC:1.2.1.2)
Formate dehydrogenase-N, alpha subunit, nitrate-inducible n=208 Tax=Escherichia RepID=B7MMV5_ECO45
Truncated formate dehydrogenase-N alpha subunit {ECO:0000313|EMBL:BAI54928.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L2_059_052G1_scaffold_605_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18522..19406
DNA (885bp) protein (295aa)
Formate dehydrogenase-N, Fe-S (Beta) subunit, nitrate-inducible n=308 Tax=Escherichia RepID=B7MMV6_ECO45
fdnH; formate dehydrogenase-N beta subunit
Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit {ECO:0000313|EMBL:EQP56428.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_059_052G1_scaffold_605_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19399..20052
DNA (654bp) protein (218aa)
fdnI; formate dehydrogenase subunit gamma (EC:1.2.1.2)
Formate dehydrogenase, gamma subunit {ECO:0000313|EMBL:EHU59810.1}; EC=1.2.1.2 {ECO:0000313|EMBL:EHU59810.1};; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
Formate dehydrogenase, nitrate-inducible, cytochrome n=231 Tax=Escherichia RepID=E2QM29_ECOLX
L2_059_052G1_scaffold_605_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20281..20565)
DNA (285bp) protein (95aa)
Uncharacterized protein n=7 Tax=Escherichia coli RepID=J7R0W1_ECOLX
yddM; putative DNA-binding transcriptional regulator
Addiction module antidote protein HigA {ECO:0000313|EMBL:EIG83836.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
L2_059_052G1_scaffold_605_19
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20565..20843)
DNA (279bp) protein (93aa)
Uncharacterized protein n=310 Tax=Escherichia RepID=B7MMV9_ECO45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC78395.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L2_059_052G1_scaffold_605_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20939..21109
DNA (171bp) protein (57aa)
Uncharacterized protein n=132 Tax=Escherichia coli RepID=L2WR79_ECOLX
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKI15312.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_059_052G1_scaffold_605_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21029..22039)
DNA (1011bp) protein (337aa)
GroES-like protein n=2 Tax=Escherichia coli RepID=D7YT11_ECOLX
adhP; alcohol dehydrogenase
Alcohol dehydrogenase, propanol-preferring {ECO:0000313|EMBL:ESD32107.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L2_059_052G1_scaffold_605_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22173..23870)
DNA (1698bp) protein (566aa)
NAD-dependent malic enzyme {ECO:0000256|HAMAP-Rule:MF_01619}; Short=NAD-ME {ECO:0000256|HAMAP-Rule:MF_01619};; EC=1.1.1.38 {ECO:0000256|HAMAP-Rule:MF_01619};; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
NAD-dependent malic enzyme n=1 Tax=Escherichia coli HVH 9 (4-6942539) RepID=T5PQL2_ECOLX
malic protein NAD-binding protein
L2_059_052G1_scaffold_605_23
Escherichia sp. KTE52, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24027..24164)
DNA (138bp) protein (46aa)
Stationary-phase-induced ribosome-associated protein n=1369 Tax=Enterobacteriaceae RepID=SRA_ECO57
rpsV; 30S ribosomal subunit S22
Stationary-phase-induced ribosome-associated protein {ECO:0000313|EMBL:EOV50270.1}; TaxID=1182659 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE52.;"
L2_059_052G1_scaffold_605_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24266..24481)
DNA (216bp) protein (72aa)
Protein bdm homolog n=1105 Tax=cellular organisms RepID=BDM_ECO57
Biofilm-dependent modulation protein Bdm, putative
Putative biofilm-dependent modulation protein {ECO:0000313|EMBL:EII21595.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L2_059_052G1_scaffold_605_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24826..25257
DNA (432bp) protein (144aa)
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin osmC {ECO:0000313|EMBL:EZJ52188.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EZJ52188.1};; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
Peroxiredoxin OsmC n=833 Tax=Enterobacteriaceae RepID=OSMC_ECOLI
L2_059_052G1_scaffold_605_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25447..27846)
DNA (2400bp) protein (800aa)
Oxygen sensor protein DosP n=1 Tax=Escherichia coli HVH 9 (4-6942539) RepID=T5PSJ2_ECOLX
cAMP phosphodiesterase
cAMP phosphodiesterase, heme-regulated {ECO:0000313|EMBL:CAR07832.2}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
L2_059_052G1_scaffold_605_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28413..29732)
DNA (1320bp) protein (440aa)
Lipoprotein n=25 Tax=Escherichia coli RepID=L2WQF1_ECOLX
yddW; liprotein
Lipoprotein {ECO:0000313|EMBL:EQP56439.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_059_052G1_scaffold_605_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29863..31398)
DNA (1536bp) protein (512aa)
Glutamate/gamma-aminobutyrate antiporter n=213 Tax=Escherichia RepID=E2QM40_ECOLX
gadC; glutamate:gamma-aminobutyric acid antiporter
Putative glutamate/gamma-aminobutyrate antiporter {ECO:0000313|EMBL:EHU31057.1}; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2A.;"
L2_059_052G1_scaffold_605_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31554..31646)
DNA (93bp) protein (31aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Glutamate decarboxylase n=1 Tax=Escherichia coli ATCC 25922 RepID=R9EDW3_ECOLX
gadB; glutamate decarboxylase
Displaying 29 items

View Taxonomy