ggKbase home page

L2_059_052G1_scaffold_795

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_795_1
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..411)
DNA (411bp) protein (137aa)
Lipoprotein NlpI n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2SCN4_ENTAL
SBOV33481; conserved hypothetical protein
Lipoprotein NlpI {ECO:0000256|PIRNR:PIRNR004654}; TaxID=1354030 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae P101.;"
L2_059_052G1_scaffold_795_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(521..2437)
DNA (1917bp) protein (639aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Polyribonucleotide nucleotidyltransferase n=6 Tax=Citrobacter RepID=J1G5V5_9ENTR
polynucleotide phosphorylase/polyadenylase
L2_059_052G1_scaffold_795_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3229..4173)
DNA (945bp) protein (315aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
tRNA pseudouridine synthase B n=4 Tax=Citrobacter RepID=J0M8F3_9ENTR
truB; tRNA pseudouridine synthase B
L2_059_052G1_scaffold_795_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4173..4577)
DNA (405bp) protein (135aa)
Ribosome-binding factor A n=20 Tax=Enterobacteriaceae RepID=D5CCB1_ENTCC
ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_059_052G1_scaffold_795_5
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4724..5044)
DNA (321bp) protein (107aa)
Translation initiation factor IF-2 n=1 Tax=Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1700 RepID=U6QP89_SALET
infB; translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000313|EMBL:AKG75912.1}; TaxID=696867 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Enteritidis str. 18569.;"
L2_059_052G1_scaffold_795_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5145..7271)
DNA (2127bp) protein (709aa)
Translation initiation factor IF-2 n=4 Tax=Citrobacter RepID=J0M1P9_9ENTR
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
infB; translation initiation factor IF-2
L2_059_052G1_scaffold_795_7
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7296..8783)
DNA (1488bp) protein (496aa)
Transcription elongation protein nusA n=10 Tax=Citrobacter RepID=C1M9X2_9ENTR
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
nusA; transcription elongation factor NusA
L2_059_052G1_scaffold_795_8
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8812..9264)
DNA (453bp) protein (151aa)
Ribosome maturation factor RimP n=12 Tax=Enterobacteriaceae RepID=C1M9X3_9ENTR
ribosome maturation protein RimP
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
L2_059_052G1_scaffold_795_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9788..11131
DNA (1344bp) protein (448aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009500}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00581}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Argininosuccinate synthase n=7 Tax=Citrobacter RepID=J0M8F6_9ENTR
argininosuccinate synthase
L2_059_052G1_scaffold_795_10
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11414..11746)
DNA (333bp) protein (111aa)
Protein-export membrane protein secG n=12 Tax=Bacteria RepID=C1M9X5_9ENTR
Protein-export membrane protein SecG {ECO:0000313|EMBL:EOQ45988.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
secG; preprotein translocase subunit SecG
L2_059_052G1_scaffold_795_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11914..12807)
DNA (894bp) protein (298aa)
Transcriptional regulator n=2 Tax=Citrobacter RepID=J0M1Q4_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX67965.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
LysR family transcriptional regulator
L2_059_052G1_scaffold_795_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12956..14089
DNA (1134bp) protein (378aa)
Isoaspartyl dipeptidase {ECO:0000256|PIRNR:PIRNR001238}; EC=3.4.19.- {ECO:0000256|PIRNR:PIRNR001238};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Isoaspartyl dipeptidase n=3 Tax=Citrobacter RepID=M3CI60_CITFR
isoaspartyl dipeptidase
L2_059_052G1_scaffold_795_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14100..15566
DNA (1467bp) protein (489aa)
C4-dicarboxylate transporter n=3 Tax=Citrobacter RepID=J0VUI5_9ENTR
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KJC04347.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
dcuD; C4-dicarboxylate transporter
L2_059_052G1_scaffold_795_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15612..16949)
DNA (1338bp) protein (446aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=7 Tax=Citrobacter RepID=J0M8G1_9ENTR
L2_059_052G1_scaffold_795_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16942..17790)
DNA (849bp) protein (283aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
folP; dihydropteroate synthase (EC:2.5.1.15)
7,8-dihydropteroate synthase n=5 Tax=Citrobacter RepID=J1G5M5_9ENTR
L2_059_052G1_scaffold_795_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17889..19832)
DNA (1944bp) protein (648aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
ATP-dependent zinc metalloprotease FtsH n=8 Tax=Citrobacter RepID=C1M9Y1_9ENTR
hflB; ATP-dependent metalloprotease
L2_059_052G1_scaffold_795_17
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19987..20472)
DNA (486bp) protein (162aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547, ECO:0000256|SAAS:SAAS00042948}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547, ECO:0000256|SAAS:SAAS00042802};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=883121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5246.;"
Ribosomal RNA large subunit methyltransferase E n=12 Tax=Enterobacteriaceae RepID=G8WJ36_KLEOK
rrmJ; 23S rRNA methyltransferase
Displaying 17 items

View Taxonomy