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L2_059_052G1_scaffold_417

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_417_1
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..275
DNA (273bp) protein (91aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;"
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VU76_9ACTO
L2_059_052G1_scaffold_417_2
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

323..979
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2WCQ3_9ACTO
LuxR family transcriptional regulator {ECO:0000313|EMBL:KGF00647.1}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;"
LuxR family transcriptional regulator
L2_059_052G1_scaffold_417_3
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1017..2666)
DNA (1650bp) protein (550aa)
Uncharacterized protein n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VS87_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD30338.1}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b.;"
GAF sensor signal transduction histidine kinase
L2_059_052G1_scaffold_417_4
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2678..4456)
DNA (1779bp) protein (593aa)
Thiol reductant ABC exporter, CydC subunit n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2WR46_9ACTO
ABC transporter {ECO:0000313|EMBL:KGF00646.1}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;"
ABC transporter
L2_059_052G1_scaffold_417_5
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4453..6186)
DNA (1734bp) protein (578aa)
Thiol reductant ABC exporter, CydD subunit n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VW39_9ACTO
Cysteine ABC transporter permease {ECO:0000313|EMBL:KGF00645.1}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;"
ABC transporter ATP-binding protein
L2_059_052G1_scaffold_417_6
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6293..7417)
DNA (1125bp) protein (375aa)
cydB; cytochrome bd ubiquinol oxidase subunit II (EC:1.10.3.-)
Cytochrome d ubiquinol oxidase, subunit II n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VU79_9ACTO
Cytochrome C oxidase assembly protein {ECO:0000313|EMBL:KGF00876.1}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;"
L2_059_052G1_scaffold_417_7
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7436..8977)
DNA (1542bp) protein (514aa)
cydA; cytochrome bd ubiquinol oxidase subunit I (EC:1.10.3.-)
Uncharacterized protein n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2WCQ6_9ACTO
Cytochrome BD ubiquinol oxidase subunit I {ECO:0000313|EMBL:KGF00875.1}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;"
L2_059_052G1_scaffold_417_8
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9475..12063
DNA (2589bp) protein (863aa)
Rne/Rng family ribonuclease n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VS91_9ACTO
RNA-binding protein {ECO:0000313|EMBL:KGF00874.1}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;"
ribonuclease, Rne/Rng family
L2_059_052G1_scaffold_417_9
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12231..12539
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2WR50_9ACTO
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;"
50S ribosomal protein L21
L2_059_052G1_scaffold_417_10
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12587..12847
DNA (261bp) protein (87aa)
50S ribosomal protein L27 n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VW44_9ACTO
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;"
rpmA; 50S ribosomal protein L27
L2_059_052G1_scaffold_417_11
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12942..14468
DNA (1527bp) protein (509aa)
GTPase Obg n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VU83_9ACTO
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;"
GTP-binding protein Obg/CgtA
L2_059_052G1_scaffold_417_12
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14543..15157
DNA (615bp) protein (205aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b.;"
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:3.5.4.4)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2WCQ8_9ACTO
L2_059_052G1_scaffold_417_13
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15183..15533
DNA (351bp) protein (117aa)
Ribosomal silencing factor RsfS n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VS95_9ACTO
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;"
hypothetical protein
L2_059_052G1_scaffold_417_14
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15549..16169
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2WR53_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGF00868.1}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;"
phosphoglycerate mutase
L2_059_052G1_scaffold_417_15
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16473..17828)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2WCR3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD30352.1}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b.;"
GntR family transcriptional regulator
L2_059_052G1_scaffold_417_16
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17918..18799
DNA (882bp) protein (294aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;"
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VS99_9ACTO
pyridoxal biosynthesis lyase
L2_059_052G1_scaffold_417_17
Trueperella pyogenes, Trueperella, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19017..19736
DNA (720bp) protein (240aa)
Azaleucine resistance protein AzlC n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2WR58_9ACTO
branched-chain amino acid ABC transporter permease
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:AHU89136.1}; TaxID=1661 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Trueperella.;" source="Trueperella pyogenes.;"
L2_059_052G1_scaffold_417_18
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19733..20053
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VU91_9ACTO
Branched-chain amino acid ABC transporter {ECO:0000313|EMBL:KGF02195.1}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;"
branched-chain amino acid transporter
L2_059_052G1_scaffold_417_19
Propionimicrobium lymphophilum, Propionimicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20147..22531
DNA (2385bp) protein (795aa)
UPI0003D79771 related cluster n=1 Tax=unknown RepID=UPI0003D79771
Uncharacterized protein {ECO:0000313|EMBL:EPD32204.1}; TaxID=883161 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionimicrobium.;" source="Propionimicrobium lymphophilum ACS-093-V-SCH5.;"
hypothetical protein
L2_059_052G1_scaffold_417_20
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22627..23049
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2WCR6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD30357.1}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b.;"
hypothetical protein
L2_059_052G1_scaffold_417_21
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23138..24091
DNA (954bp) protein (318aa)
Voltage-dependent potassium channel beta subunit n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VSA5_9ACTO
Voltage-dependent potassium channel beta subunit {ECO:0000313|EMBL:EPD30358.1}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b.;"
NADP-dependent aryl-alcohol dehydrogenase
L2_059_052G1_scaffold_417_22
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24071..25003)
DNA (933bp) protein (311aa)
ABC transporter n=1 Tax=Kocuria rhizophila RepID=UPI0002F8F351
ABC transporter {ECO:0000313|EMBL:KGF02198.1}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;"
hypothetical protein
Displaying 22 items

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