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L2_059_256G1_scaffold_1135

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_1135_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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231..2255
DNA (2025bp) protein (675aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGY1_9FIRM
L2_059_256G1_scaffold_1135_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2396..5830
DNA (3435bp) protein (1145aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75784.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_059_256G1_scaffold_1135_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5987..6535
DNA (549bp) protein (183aa)
stage V sporulation protein T n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003056902
Uncharacterized protein {ECO:0000313|EMBL:CDD79780.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcriptional regulator, AbrB family
L2_059_256G1_scaffold_1135_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6673..7875
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75782.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted phosphohydrolases
L2_059_256G1_scaffold_1135_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7968..9431)
DNA (1464bp) protein (488aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
putative nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGX0_9FIRM
L2_059_256G1_scaffold_1135_6
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10002..10556
DNA (555bp) protein (185aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LUF0_9FIRM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBL24408.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_059_256G1_scaffold_1135_7
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10553..11776
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DCN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD87986.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
hypothetical protein
L2_059_256G1_scaffold_1135_8
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12082..12549
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JQB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS36171.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L2_059_256G1_scaffold_1135_9
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12674..13693
DNA (1020bp) protein (340aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0ESB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17777.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L2_059_256G1_scaffold_1135_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13911..15167
DNA (1257bp) protein (419aa)
N-acyl-D-glucosamine 2-epimerase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI51_9FIRM
N-acyl-D-glucosamine 2-epimerase {ECO:0000313|EMBL:CDD76998.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
N-acyl-D-glucosamine 2-epimerase
L2_059_256G1_scaffold_1135_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15285..15647)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75779.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
amino acid carrier protein
L2_059_256G1_scaffold_1135_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15711..16355)
DNA (645bp) protein (215aa)
Orotate phosphoribosyltransferase (EC:2.4.2.10)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75778.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_059_256G1_scaffold_1135_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17173..17868
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75777.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_059_256G1_scaffold_1135_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17953..18717
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75776.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_059_256G1_scaffold_1135_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18911..20470
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75776.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Signal transduction histidine kinase
L2_059_256G1_scaffold_1135_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20606..21316
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79723.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Acyl-ACP thioesterase
L2_059_256G1_scaffold_1135_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21524..22354
DNA (831bp) protein (277aa)
Rhamnulose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955}; EC=4.1.2.19 {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L-rhamnulose 1-phosphate aldolase (EC:4.1.2.19)
Rhamnulose-1-phosphate aldolase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CP68_9FIRM
L2_059_256G1_scaffold_1135_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22506..23198
DNA (693bp) protein (231aa)
L-ribulose 5-phosphate 4-epimerase (EC:5.1.3.4)
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGW9_9FIRM
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EES75773.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_059_256G1_scaffold_1135_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23312..24130
DNA (819bp) protein (273aa)
Acetyl esterase family enzyme n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CP80_9FIRM
Acetyl esterase family enzyme {ECO:0000313|EMBL:CDD79731.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
acetyl esterase
L2_059_256G1_scaffold_1135_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24366..25205
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75770.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_059_256G1_scaffold_1135_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25339..28608
DNA (3270bp) protein (1090aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CP95_9FIRM
L2_059_256G1_scaffold_1135_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28681..29679
DNA (999bp) protein (333aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=2 Tax=Ruminococcus RepID=C6JGW4_9FIRM
L2_059_256G1_scaffold_1135_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29683..31077
DNA (1395bp) protein (465aa)
H(+)-transporting two-sector ATPase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQ30_9FIRM
H(+)-transporting two-sector ATPase {ECO:0000313|EMBL:CDD79737.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Trk-type K+ transport systems, membrane components
L2_059_256G1_scaffold_1135_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31152..31805
DNA (654bp) protein (218aa)
TrkA-N domain-containing protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQN6_9FIRM
TrkA-N domain-containing protein {ECO:0000313|EMBL:CDD79738.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
K+ transport systems, NAD-binding component
L2_059_256G1_scaffold_1135_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31815..32588
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79740.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
rRNA methylases
L2_059_256G1_scaffold_1135_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32609..33043
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79742.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Membrane protein implicated in regulation of membrane protease activity
L2_059_256G1_scaffold_1135_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33046..33987
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75763.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Membrane protease subunits, stomatin/prohibitin homologs
L2_059_256G1_scaffold_1135_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34024..35025
DNA (1002bp) protein (334aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=2 Tax=Ruminococcus RepID=C6JGV8_9FIRM
L2_059_256G1_scaffold_1135_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35025..35828
DNA (804bp) protein (268aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Transcriptional regulator and biotin acetyl-CoA-carboxylase synthetase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPA6_9FIRM
Transcriptional regulator and biotin acetyl-CoA-carboxylase synthetase {ECO:0000313|EMBL:CDD79745.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_059_256G1_scaffold_1135_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35867..36232
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79746.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
Displaying items 1-30 of 49 in total

View Taxonomy