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L2_059_256G1_scaffold_1200

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_1200_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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502..864
DNA (363bp) protein (121aa)
Glyoxalase family protein n=2 Tax=Clostridiales RepID=D3AUB8_9CLOT
Glyoxalase family protein {ECO:0000313|EMBL:EFC94587.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Lactoylglutathione lyase and related lyases
L2_059_256G1_scaffold_1200_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1017..1958
DNA (942bp) protein (314aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621, ECO:0000313|EMBL:CBK99627.1}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
tRNA-dihydrouridine synthase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K028_9FIRM
tRNA-dihydrouridine synthase
L2_059_256G1_scaffold_1200_3
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2042..2287)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q189_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30483.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_059_256G1_scaffold_1200_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2439..2846
DNA (408bp) protein (136aa)
phosphopantethiene--protein transferase domain (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071082};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Holo-[acyl-carrier-protein] synthase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K029_9FIRM
L2_059_256G1_scaffold_1200_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2981..3331
DNA (351bp) protein (117aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
mRNA interferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K030_9FIRM
Growth inhibitor
L2_059_256G1_scaffold_1200_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3395..3790)
DNA (396bp) protein (132aa)
Mn-dependent transcriptional regulator n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K031_9FIRM
Mn-dependent transcriptional regulator
Mn-dependent transcriptional regulator {ECO:0000313|EMBL:CBK99630.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_059_256G1_scaffold_1200_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3940..4497)
DNA (558bp) protein (186aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region (EC:4.2.1.2)
Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region {ECO:0000313|EMBL:CBK99631.1}; EC=4.2.1.2 {ECO:0000313|EMBL:CBK99631.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K032_9FIRM
L2_059_256G1_scaffold_1200_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4648..5487)
DNA (840bp) protein (280aa)
fumarase alpha subunit (EC:4.2.1.2)
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAW0_9FIRM
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:EEU94943.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L2_059_256G1_scaffold_1200_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5503..6675)
DNA (1173bp) protein (391aa)
Malic enzyme (EC:1.1.1.38)
Malic enzyme {ECO:0000313|EMBL:CBK99634.1}; EC=1.1.1.38 {ECO:0000313|EMBL:CBK99634.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Malic enzyme n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K035_9FIRM
L2_059_256G1_scaffold_1200_10
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6922..8061
DNA (1140bp) protein (380aa)
Trigger factor n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q429_9FIRM
Trigger factor {ECO:0000256|RuleBase:RU003914}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
trigger factor
L2_059_256G1_scaffold_1200_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8120..8551)
DNA (432bp) protein (144aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K036_9FIRM
transcriptional regulator, BadM/Rrf2 family
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:CBK99635.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_059_256G1_scaffold_1200_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8827..9759
DNA (933bp) protein (311aa)
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985, ECO:0000313|EMBL:CBK99636.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Cysteine synthase A n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K037_9FIRM
L2_059_256G1_scaffold_1200_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10015..12627
DNA (2613bp) protein (871aa)
ATP-dependent chaperone ClpB n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K038_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
ATP-dependent chaperone ClpB
L2_059_256G1_scaffold_1200_14
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12805..14121
DNA (1317bp) protein (439aa)
CBS domain pair n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QJ32_9FIRM
CBS domain pair {ECO:0000313|EMBL:CDC30901.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Hemolysins and related proteins containing CBS domains
L2_059_256G1_scaffold_1200_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14182..15081)
DNA (900bp) protein (300aa)
EDD domain protein, DegV family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K039_9FIRM
EDD domain protein, DegV family
EDD domain protein, DegV family {ECO:0000313|EMBL:CBK99638.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_059_256G1_scaffold_1200_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15115..16410)
DNA (1296bp) protein (432aa)
Adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000313|EMBL:CBK99639.1};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Adenylosuccinate synthetase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K040_9FIRM
L2_059_256G1_scaffold_1200_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16606..16809)
DNA (204bp) protein (68aa)
UPF0291 protein FP2_23020 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K041_9FIRM
hypothetical protein
UPF0291 protein FP2_23020 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_059_256G1_scaffold_1200_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17197..17829
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZKI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06314.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_059_256G1_scaffold_1200_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17924..18823)
DNA (900bp) protein (300aa)
Major Facilitator Superfamily n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K042_9FIRM
Major Facilitator Superfamily.
Major Facilitator Superfamily {ECO:0000313|EMBL:CBK99641.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_059_256G1_scaffold_1200_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19428..20324)
DNA (897bp) protein (299aa)
Predicted NADH:ubiquinone oxidoreductase, subunit RnfB n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K043_9FIRM
Predicted NADH:ubiquinone oxidoreductase, subunit RnfB
Predicted NADH:ubiquinone oxidoreductase, subunit RnfB {ECO:0000313|EMBL:CBK99642.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_059_256G1_scaffold_1200_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20340..20972)
DNA (633bp) protein (211aa)
Electron transport complex, RnfABCDGE type, A subunit n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K044_9FIRM
electron transport complex, RnfABCDGE type, A subunit
Electron transport complex, RnfABCDGE type, A subunit {ECO:0000313|EMBL:CBK99643.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_059_256G1_scaffold_1200_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20977..21639)
DNA (663bp) protein (221aa)
Electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K045_9FIRM
electron transport complex, RnfABCDGE type, E subunit
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_059_256G1_scaffold_1200_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21656..22204)
DNA (549bp) protein (183aa)
Predicted NADH:ubiquinone oxidoreductase, subunit RnfG n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K046_9FIRM
Predicted NADH:ubiquinone oxidoreductase, subunit RnfG
Predicted NADH:ubiquinone oxidoreductase, subunit RnfG {ECO:0000313|EMBL:CBK99645.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_059_256G1_scaffold_1200_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22201..23154)
DNA (954bp) protein (318aa)
Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K047_9FIRM
electron transport complex, RnfABCDGE type, D subunit
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_059_256G1_scaffold_1200_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23154..24476)
DNA (1323bp) protein (441aa)
Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=root RepID=D4K048_9FIRM
electron transport complex, RnfABCDGE type, C subunit
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_059_256G1_scaffold_1200_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24807..24929
DNA (123bp) protein (41aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K049_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99648.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_059_256G1_scaffold_1200_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25068..25604)
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K050_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99649.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_059_256G1_scaffold_1200_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25601..27481)
DNA (1881bp) protein (627aa)
Predicted glycosyltransferases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K051_9FIRM
Predicted glycosyltransferases
Predicted glycosyltransferases {ECO:0000313|EMBL:CBK99650.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_059_256G1_scaffold_1200_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27488..28231)
DNA (744bp) protein (248aa)
ABC-type polysaccharide/polyol phosphate transport system, ATPase component n=2 Tax=root RepID=D4K052_9FIRM
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
ABC-type polysaccharide/polyol phosphate transport system, ATPase component {ECO:0000313|EMBL:CBK99651.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_059_256G1_scaffold_1200_30
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28248..29039)
DNA (792bp) protein (264aa)
ABC-type polysaccharide/polyol phosphate export systems permease component n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q074_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
Displaying items 1-30 of 37 in total

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