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L2_059_256G1_scaffold_4587

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_4587_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..532
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=T5RWY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQN61067.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_059_256G1_scaffold_4587_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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548..799
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45258.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
recombinase
L2_059_256G1_scaffold_4587_3
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(847..2523)
DNA (1677bp) protein (559aa)
TnpX site-specific recombinase family protein n=2 Tax=unclassified Lachnospiraceae RepID=H1LZ50_9FIRM
TnpX site-specific recombinase family protein {ECO:0000313|EMBL:EHO49671.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_059_256G1_scaffold_4587_4
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2626..2790)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium difficile E9 RepID=U4APP7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EDR97079.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
hypothetical protein
L2_059_256G1_scaffold_4587_5
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(3262..3516)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YA01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13213.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L2_059_256G1_scaffold_4587_6
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3497..3940)
DNA (444bp) protein (148aa)
DNA-directed RNA polymerase specialized sigma subunit (EC:2.7.7.-)
Sigma-70 family RNA polymerase sigma factor (Fragment) n=1 Tax=Dorea sp. 5-2 RepID=R9MMZ9_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS72173.1}; Flags: Fragment;; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
L2_059_256G1_scaffold_4587_7
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4594..5520)
DNA (927bp) protein (309aa)
ABC transporter permease protein n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NKY3_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDF12747.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
hypothetical protein
Displaying 7 items

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