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L2_059_256G1_scaffold_2862

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_2862_1
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..301
DNA (300bp) protein (100aa)
RNA polymerase sigma factor n=2 Tax=Oscillibacter RepID=U2R455_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative RNA polymerase sigma factor
L2_059_256G1_scaffold_2862_2
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(243..2231)
DNA (1989bp) protein (663aa)
dgt; deoxyguanosinetriphosphate triphosphohydrolase Dgt (EC:3.1.5.1)
Putative dGTPase n=1 Tax=Desulfitobacterium hafniense DP7 RepID=G9XPY8_DESHA
Putative dGTPase {ECO:0000313|EMBL:EHL06282.1}; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense DP7.;"
L2_059_256G1_scaffold_2862_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2268..3251)
DNA (984bp) protein (328aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23257.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_059_256G1_scaffold_2862_4
unknown

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3547..3717
DNA (171bp) protein (57aa)

This feature has no annotations

L2_059_256G1_scaffold_2862_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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3745..5328
DNA (1584bp) protein (528aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6D5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54211.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative recombinase
L2_059_256G1_scaffold_2862_6
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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5386..5724
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KH08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS45744.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
recombinase
L2_059_256G1_scaffold_2862_7
Synergistes sp. 3_1_syn1, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(5745..6623)
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PUV0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHL68211.1}; TaxID=457415 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes sp. 3_1_syn1.;"
L2_059_256G1_scaffold_2862_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6981..8594
DNA (1614bp) protein (538aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CHZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30199.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
resolvase family site-specific recombinase
L2_059_256G1_scaffold_2862_9
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8630..9259)
DNA (630bp) protein (210aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor n=2 Tax=Oscillibacter RepID=U2QL72_9FIRM
L2_059_256G1_scaffold_2862_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9499..9741
DNA (243bp) protein (81aa)
Preprotein translocase, SecG subunit n=2 Tax=Oscillibacter RepID=U2QN55_9FIRM
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:ERK63643.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
secG; preprotein translocase SecG subunit
L2_059_256G1_scaffold_2862_11
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9787..10497)
DNA (711bp) protein (237aa)
Polysaccharide deacetylase n=2 Tax=Oscillibacter RepID=U2S577_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:ERK63642.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative hydrolase
L2_059_256G1_scaffold_2862_12
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10657..10935)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R451_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK63641.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_059_256G1_scaffold_2862_13
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10969..11259)
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QL67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK63640.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_059_256G1_scaffold_2862_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11356..11700)
DNA (345bp) protein (115aa)
50S ribosomal protein L17 n=2 Tax=Oscillibacter RepID=U2Q578_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
rplQ; 50S ribosomal protein L17
L2_059_256G1_scaffold_2862_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11759..12712)
DNA (954bp) protein (318aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
rpoA; DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=2 Tax=Oscillibacter RepID=U2QN60_9FIRM
L2_059_256G1_scaffold_2862_16
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12802..13404)
DNA (603bp) protein (201aa)
30S ribosomal protein S4 n=2 Tax=Oscillibacter RepID=U2S582_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
rpsD; 30S ribosomal protein S4
L2_059_256G1_scaffold_2862_17
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13428..13835)
DNA (408bp) protein (136aa)
30S ribosomal protein S11 n=2 Tax=Oscillibacter RepID=U2R447_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
rpsK; 30S ribosomal protein S11
L2_059_256G1_scaffold_2862_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13851..14216)
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=2 Tax=Oscillibacter RepID=U2QL63_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
rpsM; 30S ribosomal protein S13
L2_059_256G1_scaffold_2862_19
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14243..14356)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=4 Tax=Firmicutes RepID=G4KVX3_OSCVS
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L2_059_256G1_scaffold_2862_20
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(14409..14627)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=3 Tax=Firmicutes RepID=R5D6T4_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
infA; translation initiation factor IF-1
L2_059_256G1_scaffold_2862_21
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14631..14915)
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2S590_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK63632.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_059_256G1_scaffold_2862_22
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14926..15678)
DNA (753bp) protein (251aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=2 Tax=Oscillibacter RepID=U2R442_9FIRM
L2_059_256G1_scaffold_2862_23
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15683..15907)
DNA (225bp) protein (75aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS00079673}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS00079673};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Oscillibacter sp. KLE 1728 RepID=U2QP15_9FIRM
Displaying 23 items

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