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L2_059_256G1_scaffold_37

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_37_1
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..140
DNA (138bp) protein (46aa)
Rubrerythrin n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LXH5_9FIRM
Rubrerythrin
Rubredoxin {ECO:0000313|EMBL:EDM63574.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L2_059_256G1_scaffold_37_2
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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231..386
DNA (156bp) protein (52aa)
Rubredoxin n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MUC6_9FIRM
Rubredoxin {ECO:0000256|RuleBase:RU003820}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
rubredoxin-NAD+ reductase
L2_059_256G1_scaffold_37_3
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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411..1640
DNA (1230bp) protein (410aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UUM3_9FIRM
Response regulator receiver modulated metal dependent phosphohydrolase {ECO:0000313|EMBL:CDC74417.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
response regulator receiver modulated metal dependent phosphohydrolase
L2_059_256G1_scaffold_37_4
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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1922..3634
DNA (1713bp) protein (571aa)
Methyl-accepting chemotaxis protein signaling domain protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RXS4_9FIRM
Methyl-accepting chemotaxis protein signaling domain protein {ECO:0000313|EMBL:EFF69156.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
Methyl-accepting chemotaxis protein
L2_059_256G1_scaffold_37_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3921..5639
DNA (1719bp) protein (573aa)
Alpha-amylase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZDP5_EUBR3
Alpha-amylase {ECO:0000313|EMBL:ACR77021.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
alpha-amylase
L2_059_256G1_scaffold_37_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5734..8646
DNA (2913bp) protein (971aa)
Putative secreted protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UH71_9FIRM
Putative secreted protein {ECO:0000313|EMBL:CCZ77603.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
IgA Peptidase M64.
L2_059_256G1_scaffold_37_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8770..9945
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VA88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77602.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
diguanylate cyclase (GGDEF) domain
L2_059_256G1_scaffold_37_8
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10144..10749
DNA (606bp) protein (202aa)
pul13A; pullulanase Pul13A (EC:3.2.1.41)
Pullulanase Pul13A n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z619_9FIRM
Pullulanase Pul13A {ECO:0000313|EMBL:CDA24282.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L2_059_256G1_scaffold_37_9
unknown

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comp(10844..11128)
DNA (285bp) protein (95aa)

This feature has no annotations

L2_059_256G1_scaffold_37_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11744..12139)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V5F2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78676.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_059_256G1_scaffold_37_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12140..12433)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78675.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_256G1_scaffold_37_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12807..13445)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5USG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78674.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_256G1_scaffold_37_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13435..13722)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UK48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78673.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized protein containing a Zn-finger-like domain
L2_059_256G1_scaffold_37_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14007..15746
DNA (1740bp) protein (580aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
Putative 1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VD27_9FIRM
L2_059_256G1_scaffold_37_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15865..17307
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UVE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79694.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_256G1_scaffold_37_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17616..18203
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=root RepID=R5UN40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79693.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Protein of unknown function (DUF1393).
L2_059_256G1_scaffold_37_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18271..19491)
DNA (1221bp) protein (407aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
peptidase T (EC:3.4.11.4)
Peptidase T n=1 Tax=Roseburia sp. CAG:18 RepID=R5VG17_9FIRM
L2_059_256G1_scaffold_37_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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19826..20779
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79691.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_256G1_scaffold_37_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20782..21894
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79690.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_256G1_scaffold_37_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21891..24431
DNA (2541bp) protein (847aa)
Transglutaminase-like enzymes putative cysteine proteases n=1 Tax=Roseburia sp. CAG:18 RepID=R5UVD6_9FIRM
Transglutaminase-like enzymes putative cysteine proteases {ECO:0000313|EMBL:CCZ79689.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_256G1_scaffold_37_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24452..25093)
DNA (642bp) protein (214aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UN33_9FIRM
tRNA (guanine-N(7)-)-methyltransferase
L2_059_256G1_scaffold_37_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25247..26644
DNA (1398bp) protein (466aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VG13_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CCZ79687.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
serine-type D-Ala-D-Ala carboxypeptidase
L2_059_256G1_scaffold_37_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26741..27454
DNA (714bp) protein (238aa)
Probable septum site-determining protein MinC n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8B8_9FIRM
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
septum site-determining protein MinC
L2_059_256G1_scaffold_37_24
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27477..28268
DNA (792bp) protein (264aa)
Site-determining protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z5U6_9FIRM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
septum site-determining protein MinD
L2_059_256G1_scaffold_37_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28283..28564
DNA (282bp) protein (94aa)
Cell division topological specificity factor n=1 Tax=Roseburia sp. CAG:18 RepID=R5UVD1_9FIRM
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
cell division topological specificity factor MinE
L2_059_256G1_scaffold_37_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28631..29740)
DNA (1110bp) protein (370aa)
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VD31_9FIRM
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000313|EMBL:CCZ78677.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_059_256G1_scaffold_37_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29770..30513)
DNA (744bp) protein (248aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
glucosamine-6-phosphate isomerase (EC:3.5.99.6)
glucosamine-6-phosphate deaminase n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B498DA
L2_059_256G1_scaffold_37_28
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30749..31738
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I1F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30561.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
GDSL family lipase
L2_059_256G1_scaffold_37_29
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31728..32603
DNA (876bp) protein (292aa)
Transcriptional regulator RpiR family n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0S4_9FIRM
Transcriptional regulator RpiR family {ECO:0000313|EMBL:CCY30562.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
transcriptional regulator
L2_059_256G1_scaffold_37_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32596..33561
DNA (966bp) protein (322aa)
Transcriptional regulator/sugar kinase (EC:2.7.1.2)
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:CBL09516.1}; EC=2.7.1.2 {ECO:0000313|EMBL:CBL09516.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Transcriptional regulator/sugar kinase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KRL4_9FIRM
Displaying items 1-30 of 99 in total

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