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L2_059_256G1_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_42_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..147
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM53119.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_059_256G1_scaffold_42_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

183..1307
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM53120.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_059_256G1_scaffold_42_3
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1341..2375
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZZK3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ45171.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L2_059_256G1_scaffold_42_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2557..3648
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM53121.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_059_256G1_scaffold_42_5
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3697..4494
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JCK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS31964.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L2_059_256G1_scaffold_42_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4552..5697
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM53124.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_059_256G1_scaffold_42_7
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5746..6114
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D0E2_DESAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM39266.1}; TaxID=646529 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4).;"
L2_059_256G1_scaffold_42_8
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6153..6527
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Streptococcus sp. F0441 RepID=K8MJN4_9STRE
ankyrin
Ankyrin {ECO:0000313|EMBL:AJH15127.1}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
L2_059_256G1_scaffold_42_9
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6709..7251)
DNA (543bp) protein (181aa)
Ribosomal subunit interface protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YS75_9FIRM
Ribosomal subunit interface protein {ECO:0000313|EMBL:EDN01391.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
putative ribosome-associated protein
L2_059_256G1_scaffold_42_10
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7398..8240)
DNA (843bp) protein (281aa)
fumarase alpha subunit (EC:4.2.1.2)
fumarate hydratase n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B4CAB8
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:EDN01389.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_059_256G1_scaffold_42_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8270..9424)
DNA (1155bp) protein (385aa)
Amidohydrolase family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YS80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56735.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
amidohydrolase
L2_059_256G1_scaffold_42_12
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9612..10922)
DNA (1311bp) protein (437aa)
serine protease (EC:3.4.21.-)
Trypsin n=2 Tax=Clostridiales RepID=U2ANP0_9CLOT
Trypsin {ECO:0000313|EMBL:ERI61705.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_059_256G1_scaffold_42_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10954..12387)
DNA (1434bp) protein (478aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative two-component histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Clostridiales RepID=G9YS82_9FIRM
L2_059_256G1_scaffold_42_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12384..13076)
DNA (693bp) protein (231aa)
Putative transcriptional regulatory protein ResD n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BXK0_9CLOT
Putative transcriptional regulatory protein ResD {ECO:0000313|EMBL:ERI61702.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
OmpR family two-component response regulator
L2_059_256G1_scaffold_42_15
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13450..14619)
DNA (1170bp) protein (390aa)
Cation diffusion facilitator family transporter n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NR09_9FIRM
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EDN01505.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
putative cation efflux protein
L2_059_256G1_scaffold_42_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14770..16677)
DNA (1908bp) protein (636aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9F0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57121.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative esterase
L2_059_256G1_scaffold_42_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16776..17357)
DNA (582bp) protein (194aa)
ABC transporter, ATP-binding protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWJ7_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHM38830.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ABC transporter
L2_059_256G1_scaffold_42_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17341..18126)
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9E2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57119.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
binding-protein-dependent transport systems inner membrane component
L2_059_256G1_scaffold_42_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18480..19511)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM38832.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative lipoprotein
L2_059_256G1_scaffold_42_20
unknown

Not on your lists

19676..19858
DNA (183bp) protein (61aa)

This feature has no annotations

L2_059_256G1_scaffold_42_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19909..21018
DNA (1110bp) protein (370aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57115.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative LytR family regulatory protein
L2_059_256G1_scaffold_42_22
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21086..21958)
DNA (873bp) protein (291aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:EDM99369.1}; EC=1.3.1.12 {ECO:0000313|EMBL:EDM99369.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Prephenate dehydrogenase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NX21_9FIRM
prephenate dehydrogenase
L2_059_256G1_scaffold_42_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21962..22981)
DNA (1020bp) protein (340aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=3 Tax=Clostridiales RepID=G9YPU8_9FIRM
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:EHO34854.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_059_256G1_scaffold_42_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23254..24180)
DNA (927bp) protein (309aa)
Cysteine synthase A n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQ43_9FIRM
Cysteine synthase A {ECO:0000313|EMBL:EHM52038.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
cysteine synthase A
L2_059_256G1_scaffold_42_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24337..25206)
DNA (870bp) protein (290aa)
Lipoprotein n=2 Tax=Clostridiales RepID=G9YQ44_9FIRM
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
NLPA lipoprotein
L2_059_256G1_scaffold_42_26
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25664..26419)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LYE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63578.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
ABC-type metal ion transport system, permease component
L2_059_256G1_scaffold_42_27
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26412..27416)
DNA (1005bp) protein (335aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ABC transporter, ATP-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NX36_9FIRM
ABC transporter
L2_059_256G1_scaffold_42_28

Not on your lists

comp(27568..28902)
DNA (1335bp) protein (445aa)
ABC superfamily ATP binding cassette transporter n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FLH3_9FIRM
ABC superfamily ATP binding cassette transporter, ABC protein {ECO:0000313|EMBL:EKC81563.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ABC transporter
L2_059_256G1_scaffold_42_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29220..29744)
DNA (525bp) protein (175aa)
Putative spore maturation protein B n=3 Tax=Clostridiales RepID=G9YUM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55027.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
spmB; spore maturation protein B
L2_059_256G1_scaffold_42_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29744..30358)
DNA (615bp) protein (205aa)
Putative spore maturation protein A n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUL9_9FIRM
Putative spore maturation protein A {ECO:0000313|EMBL:EHM42013.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
spmA; spore maturation protein A
Displaying items 1-30 of 97 in total

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