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L2_059_256G1_scaffold_101

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_101_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..201)
DNA (201bp) protein (67aa)
30S ribosomal protein S9 n=3 Tax=Clostridiales RepID=G9YW61_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rpsI; 30S ribosomal protein S9
L2_059_256G1_scaffold_101_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(219..650)
DNA (432bp) protein (144aa)
50S ribosomal protein L13 n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPQ7_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
rplM; 50S ribosomal protein L13
L2_059_256G1_scaffold_101_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

921..1670
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46518.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
PP-loop domain-containing protein
L2_059_256G1_scaffold_101_4
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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1672..2766
DNA (1095bp) protein (365aa)
Ser/Thr phosphatase family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQM6_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EDN01372.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
putative hydrolase
L2_059_256G1_scaffold_101_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2763..5024
DNA (2262bp) protein (754aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=G9YMD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM54192.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_059_256G1_scaffold_101_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5021..5629
DNA (609bp) protein (203aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=2 Tax=Clostridiales RepID=G9YME0_9FIRM
L2_059_256G1_scaffold_101_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5703..6356)
DNA (654bp) protein (218aa)
Bacterial regulatory s, tetR family protein n=19 Tax=Clostridium difficile RepID=T2Z6A6_CLODI
Putative transcriptional regulator {ECO:0000313|EMBL:CDT64125.1}; Transcriptional regulator, TetR family {ECO:0000313|EMBL:CDS88582.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
transcriptional regulator
L2_059_256G1_scaffold_101_8
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6768..7703
DNA (936bp) protein (312aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RME1_9CLOT
L2_059_256G1_scaffold_101_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7755..8072
DNA (318bp) protein (106aa)
Thioredoxin n=8 Tax=Clostridium RepID=A8RMC3_9CLOT
Thioredoxin {ECO:0000313|EMBL:ENZ31731.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Thioredoxin domain-containing protein
L2_059_256G1_scaffold_101_10
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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8136..8267
DNA (132bp) protein (44aa)
Glycine/sarcosine/betaine reductase complex protein A {ECO:0000313|EMBL:EDR47992.1}; EC=1.21.4.2 {ECO:0000313|EMBL:EDR47992.1};; EC=1.21.4.3 {ECO:0000313|EMBL:EDR47992.1};; EC=1.21.4.4 {ECO:0000313|EMBL:EDR47992.1};; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
Glycine/sarcosine/betaine reductase complex protein A n=3 Tax=Clostridiales RepID=B0G328_9FIRM
Glycine reductase complex selenoprotein A.
L2_059_256G1_scaffold_101_11
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8283..8606
DNA (324bp) protein (108aa)
Glycine reductase complex selenoprotein A. (EC:1.21.4.4)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CFM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA75488.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L2_059_256G1_scaffold_101_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8771..10309
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9Y2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX51059.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L2_059_256G1_scaffold_101_13
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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10323..11480
DNA (1158bp) protein (386aa)
Fatty acid/phospholipid synthesis protein PlsX n=1 Tax=Catonella morbi ATCC 51271 RepID=V2XI21_9FIRM
Fatty acid/phospholipid synthesis protein PlsX {ECO:0000313|EMBL:ESL01819.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
fatty acid/phospholipid biosynthesis protein
L2_059_256G1_scaffold_101_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11692..12156
DNA (465bp) protein (155aa)
DNA-binding helix-turn-helix protein n=2 Tax=Oscillibacter RepID=U2QGF3_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK61829.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Cro/CI family transcriptional regulator
L2_059_256G1_scaffold_101_15

Not on your lists

12184..12600
DNA (417bp) protein (139aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1SUN4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC50956.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_059_256G1_scaffold_101_16
unknown

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12634..13152
DNA (519bp) protein (173aa)

This feature has no annotations

L2_059_256G1_scaffold_101_17
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13127..13696
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KGP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33735.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
VanZ like family.
L2_059_256G1_scaffold_101_18
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13863..14393
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KDF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS44515.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
L2_059_256G1_scaffold_101_19
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14511..15929)
DNA (1419bp) protein (473aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Pyruvate kinase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P179_9FIRM
pyruvate kinase
L2_059_256G1_scaffold_101_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16110..17324)
DNA (1215bp) protein (405aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CC91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55268.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_059_256G1_scaffold_101_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17337..18764)
DNA (1428bp) protein (476aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CC90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33802.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
membrane bound O-acyl transferase MBOAT family protein
L2_059_256G1_scaffold_101_22
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18793..19857)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P1P2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM97934.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_059_256G1_scaffold_101_23
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19861..20229)
DNA (369bp) protein (123aa)
Lactoylglutathione lyase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TEV6_9CLOT
Lactoylglutathione lyase {ECO:0000313|EMBL:CCZ61824.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
L2_059_256G1_scaffold_101_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20332..21201)
DNA (870bp) protein (290aa)
sdhA; L-serine dehydratase alpha chain (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CC86_9FIRM
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EHO33844.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_059_256G1_scaffold_101_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21206..21877)
DNA (672bp) protein (224aa)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=2 Tax=Clostridiales RepID=G9YMJ8_9FIRM
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EHO33843.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_059_256G1_scaffold_101_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21940..23235)
DNA (1296bp) protein (432aa)
Chloride transporter, ClC family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BSL0_9CLOT
Chloride transporter, ClC family {ECO:0000313|EMBL:ERI75200.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
chloride channel protein EriC
L2_059_256G1_scaffold_101_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23573..24877
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55260.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_059_256G1_scaffold_101_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24940..26298)
DNA (1359bp) protein (453aa)
UPF0210 protein HMPREF0372_03785 n=3 Tax=Clostridiales RepID=G9YW69_9FIRM
UPF0210 protein HMPREF0372_03785 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_059_256G1_scaffold_101_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26315..26584)
DNA (270bp) protein (90aa)
UPF0237 protein HMPREF0372_04252 n=3 Tax=Clostridiales RepID=G9YXI4_9FIRM
UPF0237 protein HMPREF0995_02049 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_059_256G1_scaffold_101_30
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26876..27118)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2W0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM97381.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
HPr-related phosphotransferase system component
Displaying items 1-30 of 69 in total

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