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L2_059_256G1_scaffold_164

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_164_1
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..718)
DNA (717bp) protein (239aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
Uncharacterized protein n=2 Tax=Blautia RepID=R5C1E7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX58677.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
L2_059_256G1_scaffold_164_2
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(708..1715)
DNA (1008bp) protein (336aa)
FecCD transporter n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VIU8_9FIRM
FecCD transporter {ECO:0000313|EMBL:EFV17164.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
ABC-type Fe3+-siderophore transport system, permease component
L2_059_256G1_scaffold_164_3
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1721..2875)
DNA (1155bp) protein (385aa)
Heme ABC transporter, heme-binding protein isdE n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WT77_9FIRM
Heme ABC transporter, heme-binding protein isdE {ECO:0000313|EMBL:EGX72455.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
heme ABC transporter, heme-binding protein isdE
L2_059_256G1_scaffold_164_4
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2856..3941)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5BSS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX58680.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
Cell surface heme-binding protein Shp.
L2_059_256G1_scaffold_164_5
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3938..7396)
DNA (3459bp) protein (1153aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WT79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72457.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Iron Transport-associated domain.
L2_059_256G1_scaffold_164_6
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7642..8382)
DNA (741bp) protein (247aa)
Magnesium-chelatase subunit D/I family n=1 Tax=Clostridium sp. CAG:127 RepID=R5P0E7_9CLOT
Magnesium-chelatase subunit D/I family {ECO:0000313|EMBL:CCZ09533.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
magnesium chelatase ATPase subunit D
L2_059_256G1_scaffold_164_7
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8478..9437)
DNA (960bp) protein (320aa)
Magnesium chelatase n=1 Tax=Clostridium sp. CAG:127 RepID=R5PI00_9CLOT
Magnesium chelatase {ECO:0000313|EMBL:CCZ09536.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
Mg-chelatase subunit ChlI
L2_059_256G1_scaffold_164_8
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9434..12889)
DNA (3456bp) protein (1152aa)
Magnesium-protoporphyrin O-methyltransferase BchH subunit n=1 Tax=Clostridium sp. CAG:127 RepID=R5P0F1_9CLOT
Magnesium-protoporphyrin O-methyltransferase BchH subunit {ECO:0000313|EMBL:CCZ09538.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
bchH; magnesium chelatase
L2_059_256G1_scaffold_164_9
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13048..15801)
DNA (2754bp) protein (918aa)
FMN-binding domain./Fibronectin type III domain./Iron Transport-associated domain n=1 Tax=Clostridium sp. CAG:122 RepID=R5RYH5_9CLOT
FMN-binding domain./Fibronectin type III domain./Iron Transport-associated domain {ECO:0000313|EMBL:CCZ39816.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
FMN-binding domain./Fibronectin type III domain./Iron Transport-associated domain.
L2_059_256G1_scaffold_164_10
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16123..20592)
DNA (4470bp) protein (1490aa)
Beta-mannanase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RF09_9CLOT
Beta-mannanase {ECO:0000313|EMBL:CCZ39815.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
CpsG; phosphomannomutase
L2_059_256G1_scaffold_164_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20856..21689)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77171.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_059_256G1_scaffold_164_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21700..22533)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77172.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Mn-dependent transcriptional regulator
L2_059_256G1_scaffold_164_13
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23131..23541)
DNA (411bp) protein (137aa)
Nucleotidyltransferase substrate binding protein HI0074 family n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H139_9FIRM
Nucleotidyltransferase substrate binding protein HI0074 family {ECO:0000313|EMBL:CDE33080.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
nucleotidyltransferase substrate binding protein, HI0074 family
L2_059_256G1_scaffold_164_14
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23528..23818)
DNA (291bp) protein (97aa)
Nucleotidyltransferase domain protein n=2 Tax=Clostridiales RepID=R7H254_9FIRM
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:CDE33078.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Predicted nucleotidyltransferases
L2_059_256G1_scaffold_164_15
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(23893..26139)
DNA (2247bp) protein (749aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit (EC:5.99.1.3)
Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H184_9FIRM
L2_059_256G1_scaffold_164_16
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26155..28080)
DNA (1926bp) protein (642aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA topoisomerase IV subunit B n=2 Tax=Ruminococcus RepID=D4LJA1_9FIRM
DNA topoisomerase IV subunit B {ECO:0000313|EMBL:CDE33075.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L2_059_256G1_scaffold_164_17
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28367..30271)
DNA (1905bp) protein (635aa)
FOG: EAL domain n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H248_9FIRM
FOG: EAL domain {ECO:0000313|EMBL:CDE33073.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
FOG: EAL domain
L2_059_256G1_scaffold_164_18
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30258..31937)
DNA (1680bp) protein (560aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H4D6_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CDE33072.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
diguanylate cyclase (GGDEF) domain
L2_059_256G1_scaffold_164_19
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32447..33610
DNA (1164bp) protein (388aa)
Predicted hydrolase (Metallo-beta-lactamase superfamily) n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H179_9FIRM
Predicted hydrolase (Metallo-beta-lactamase superfamily) {ECO:0000313|EMBL:CDE33071.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Predicted hydrolase (metallo-beta-lactamase superfamily)
L2_059_256G1_scaffold_164_20
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33738..35891)
DNA (2154bp) protein (718aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Blautia sp. KLE 1732 RepID=U2DDK6_9FIRM
L2_059_256G1_scaffold_164_21
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35908..37452)
DNA (1545bp) protein (515aa)
Exopolyphosphatase (EC:3.6.1.11)
HD domain protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H067_9FIRM
HD domain protein {ECO:0000313|EMBL:CDE33069.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L2_059_256G1_scaffold_164_22
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37477..38796)
DNA (1320bp) protein (440aa)
Predicted ATPase (AAA+ superfamily) n=2 Tax=Clostridiales RepID=R7H242_9FIRM
Predicted ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CDE33068.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Predicted ATPase (AAA+ superfamily)
L2_059_256G1_scaffold_164_23
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38819..39949)
DNA (1131bp) protein (377aa)
Prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKZ0_9FIRM
Chorismate mutase {ECO:0000313|EMBL:ERI94863.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L2_059_256G1_scaffold_164_24
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39946..41244)
DNA (1299bp) protein (433aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
Folylpolyglutamate synthase/dihydrofolate synthase {ECO:0000313|EMBL:CBL19902.1}; EC=6.3.2.17 {ECO:0000313|EMBL:CBL19902.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Folylpolyglutamate synthase/dihydrofolate synthase n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LJ91_9FIRM
L2_059_256G1_scaffold_164_25
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41498..41899
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H061_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE33064.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Protein of unknown function (DUF1113).
L2_059_256G1_scaffold_164_26
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41969..42892
DNA (924bp) protein (308aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N805_9FIRM
L2_059_256G1_scaffold_164_27
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42886..43323
DNA (438bp) protein (146aa)
Aspartate carbamoyltransferase, regulatory subunit n=3 Tax=Clostridiales RepID=D4LJ87_9FIRM
Aspartate carbamoyltransferase, regulatory subunit
Aspartate carbamoyltransferase regulatory subunit {ECO:0000313|EMBL:CDE33059.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L2_059_256G1_scaffold_164_28
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43926..45377)
DNA (1452bp) protein (484aa)
Transporter n=1 Tax=Blautia sp. KLE 1732 RepID=U2CWF8_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Na+-dependent transporters of the SNF family
L2_059_256G1_scaffold_164_29
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45919..46959)
DNA (1041bp) protein (347aa)
selenophosphate synthase (EC:2.7.9.3)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Selenide, water dikinase n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LJ85_9FIRM
L2_059_256G1_scaffold_164_30
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47169..48836)
DNA (1668bp) protein (556aa)
Uridine kinase {ECO:0000313|EMBL:CBL19895.1}; EC=2.7.1.48 {ECO:0000313|EMBL:CBL19895.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Uridine kinase (EC:2.7.1.48)
Uridine kinase n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LJ84_9FIRM
Displaying items 1-30 of 36 in total

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