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L2_059_256G1_scaffold_184

Search features with annotation key words

Displaying items 1-30 of 188 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_184_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..192
DNA (192bp) protein (64aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=C0FRF3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU98147.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L2_059_256G1_scaffold_184_2
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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195..401
DNA (207bp) protein (69aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=C0FRF2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL23600.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_059_256G1_scaffold_184_3
unknown

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comp(494..799)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Clostridium difficile RepID=UPI00017F59EA
L2_059_256G1_scaffold_184_4
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(941..1309)
DNA (369bp) protein (123aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=C0FRF0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEG94803.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L2_059_256G1_scaffold_184_5
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1314..1544)
DNA (231bp) protein (77aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=C0FRE9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL23598.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_059_256G1_scaffold_184_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1637..2977)
DNA (1341bp) protein (447aa)
Relaxase/Mobilisation nuclease domain n=3 Tax=Clostridiales RepID=D4LS39_9FIRM
Relaxase/Mobilisation nuclease domain.
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EEU98153.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L2_059_256G1_scaffold_184_7
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2938..3267)
DNA (330bp) protein (110aa)
Bacterial mobilisation protein (MobC) n=4 Tax=Clostridiales RepID=D4LS38_9FIRM
Bacterial mobilisation protein (MobC).
Bacterial mobilization protein MobC {ECO:0000313|EMBL:EDM87621.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L2_059_256G1_scaffold_184_8
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3512..3877)
DNA (366bp) protein (122aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ25266.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Predicted transcription factor, homolog of eukaryotic MBF1
L2_059_256G1_scaffold_184_9
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4032..4214
DNA (183bp) protein (61aa)
DNA binding domain, excisionase family n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS22_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:EDM87619.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L2_059_256G1_scaffold_184_10
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4207..4905
DNA (699bp) protein (233aa)
Response regulator receiver domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS21_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDM87618.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
DNA-binding response regulator
L2_059_256G1_scaffold_184_11
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4892..5980
DNA (1089bp) protein (363aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS20_9FIRM
two-component sensor histidine kinase
L2_059_256G1_scaffold_184_12
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6133..6963
DNA (831bp) protein (277aa)
Conserved domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS19_9FIRM
Conserved domain protein {ECO:0000313|EMBL:EDM87616.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L2_059_256G1_scaffold_184_13
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6965..7678
DNA (714bp) protein (238aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS18_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM87615.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
ABC-type antimicrobial peptide transport system, ATPase component
L2_059_256G1_scaffold_184_14
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7659..8855
DNA (1197bp) protein (399aa)
Efflux ABC transporter permease protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NSY8_9FIRM
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CCZ05264.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L2_059_256G1_scaffold_184_15
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8882..9367
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87613.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L2_059_256G1_scaffold_184_16
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9422..10378
DNA (957bp) protein (319aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS15_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EDM87612.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
serine-type D-Ala-D-Ala carboxypeptidase
L2_059_256G1_scaffold_184_17
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10843..11283
DNA (441bp) protein (147aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium sp. ASF502 RepID=N2AFL7_9CLOT
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EMZ25263.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
putative RNA polymerase sigma factorTn1549-like,CTn4-Orf31
L2_059_256G1_scaffold_184_18
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11264..11524
DNA (261bp) protein (87aa)
Putative conjugative transposon protein Tn1549-like CTn4-Orf32 n=1 Tax=Clostridium sp. CAG:352 RepID=R6QN00_9CLOT
Putative conjugative transposon protein Tn1549-like CTn4-Orf32 {ECO:0000313|EMBL:CDC37150.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
putative conjugative transposon proteinTn1549-like, CTn4-Orf32
L2_059_256G1_scaffold_184_19
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11947..12183
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QKL7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37153.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L2_059_256G1_scaffold_184_20
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12187..13491
DNA (1305bp) protein (435aa)
Site-specific recombinase XerD n=1 Tax=Clostridium sp. CAG:352 RepID=R6QN03_9CLOT
Site-specific recombinase XerD {ECO:0000313|EMBL:CDC37155.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Site-specific recombinase XerD
L2_059_256G1_scaffold_184_21
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13773..14210
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XKJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA12939.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
L2_059_256G1_scaffold_184_22
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14345..15142)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XDJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA12940.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
Predicted membrane protein
L2_059_256G1_scaffold_184_23
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15375..15911)
DNA (537bp) protein (179aa)
Putative stage V sporulation protein T n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XVQ4_9FIRM
Putative stage V sporulation protein T {ECO:0000313|EMBL:CDA12941.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
transcriptional regulator, AbrB family
L2_059_256G1_scaffold_184_24
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16163..17536)
DNA (1374bp) protein (458aa)
Putative efflux protein MATE family n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5Y8J3_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDA12942.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
putative efflux protein, MATE family
L2_059_256G1_scaffold_184_25
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17718..19910)
DNA (2193bp) protein (731aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XBG5_9FIRM
L2_059_256G1_scaffold_184_26
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20101..20376)
DNA (276bp) protein (92aa)
30S ribosomal protein S15 n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XKJ6_9FIRM
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
SSU ribosomal protein S15P
L2_059_256G1_scaffold_184_27
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20760..21068
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XDJ6_9FIRM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
50S ribosomal protein L21
L2_059_256G1_scaffold_184_28
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21123..21386
DNA (264bp) protein (88aa)
Predicted ribosomal protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XVQ9_9FIRM
Predicted ribosomal protein {ECO:0000313|EMBL:CDA12946.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
Predicted ribosomal protein
L2_059_256G1_scaffold_184_29
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21389..21673
DNA (285bp) protein (95aa)
50S ribosomal protein L27 n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5Y8K0_9FIRM
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
LSU ribosomal protein L27P
L2_059_256G1_scaffold_184_30
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21822..22595
DNA (774bp) protein (258aa)
Short chain dehydrogenase/reductase family oxidoreductase n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XBH0_9FIRM
Short chain dehydrogenase/reductase family oxidoreductase {ECO:0000313|EMBL:CDA12948.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
Short-chain dehydrogenases of various substrate specificities
Displaying items 1-30 of 188 in total

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