ggKbase home page

L2_059_256G1_scaffold_240

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_240_1
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(183..497)
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R7H3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK66886.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_059_256G1_scaffold_240_2
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1262..1819)
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=2 Tax=Oscillibacter RepID=U2RED4_9FIRM
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
frr; ribosome recycling factor
L2_059_256G1_scaffold_240_3
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1880..2596)
DNA (717bp) protein (239aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=2 Tax=Oscillibacter RepID=U2QVF0_9FIRM
L2_059_256G1_scaffold_240_4
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2746..3342)
DNA (597bp) protein (199aa)
GTPase (EC:3.6.1.-)
Probable GTP-binding protein EngB n=2 Tax=Oscillibacter RepID=U2R7H8_9FIRM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_059_256G1_scaffold_240_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3355..5778)
DNA (2424bp) protein (808aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
lon; ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=2 Tax=Oscillibacter RepID=U2QNK1_9FIRM
L2_059_256G1_scaffold_240_6
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5849..7171)
DNA (1323bp) protein (441aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=2 Tax=Oscillibacter RepID=U2R6K3_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
L2_059_256G1_scaffold_240_7
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7201..7785)
DNA (585bp) protein (195aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=2 Tax=Oscillibacter RepID=U2RED8_9FIRM
L2_059_256G1_scaffold_240_8
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8052..9524)
DNA (1473bp) protein (491aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Trigger factor n=2 Tax=Oscillibacter RepID=U2R7I1_9FIRM
tig; trigger factor
L2_059_256G1_scaffold_240_9
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9615..10301)
DNA (687bp) protein (229aa)
Ser/Thr phosphatase family protein n=2 Tax=Oscillibacter RepID=U2QNK6_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:ERK66897.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative hydrolase
L2_059_256G1_scaffold_240_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10340..10567)
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R6K9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK66898.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_059_256G1_scaffold_240_11
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10600..10944)
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2REE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK66899.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_059_256G1_scaffold_240_12
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11049..12536)
DNA (1488bp) protein (496aa)
thrC; threonine synthase (EC:4.2.3.1)
Threonine synthase n=2 Tax=Oscillibacter RepID=U2QVG2_9FIRM
Threonine synthase {ECO:0000313|EMBL:ERK66900.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_059_256G1_scaffold_240_13
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12562..12921)
DNA (360bp) protein (120aa)
UPF0102 protein HMPREF1545_00449 n=2 Tax=Oscillibacter RepID=U2R7I7_9FIRM
UPF0102 protein HMPREF1546_00750 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_059_256G1_scaffold_240_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12918..13547)
DNA (630bp) protein (210aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=2 Tax=Oscillibacter RepID=U2QNL0_9FIRM
L2_059_256G1_scaffold_240_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13549..13785)
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R6L1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK66903.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_059_256G1_scaffold_240_16
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13848..14084)
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2REF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK66904.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_059_256G1_scaffold_240_17
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14098..14994)
DNA (897bp) protein (299aa)
Ribosome biogenesis GTPase A n=2 Tax=Oscillibacter RepID=U2QVG9_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative GTP-binding protein
L2_059_256G1_scaffold_240_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15063..15680)
DNA (618bp) protein (206aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=2 Tax=Oscillibacter RepID=U2R7J1_9FIRM
L2_059_256G1_scaffold_240_19
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15751..16344)
DNA (594bp) protein (198aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=2 Tax=Oscillibacter RepID=U2QNL3_9FIRM
L2_059_256G1_scaffold_240_20
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16483..16824)
DNA (342bp) protein (114aa)
50S ribosomal protein L19 n=2 Tax=Oscillibacter RepID=U2R6L6_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
rplS; 50S ribosomal protein L19
L2_059_256G1_scaffold_240_21
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16964..17557)
DNA (594bp) protein (198aa)
Peptidase, M50 family n=2 Tax=Oscillibacter RepID=U2SPJ3_9FIRM
Peptidase, M50 family {ECO:0000313|EMBL:ERK56546.1}; Flags: Fragment;; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
peptidase M50 family protein
L2_059_256G1_scaffold_240_22
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17541..18602)
DNA (1062bp) protein (354aa)
Peptidase, M23 family n=2 Tax=Oscillibacter RepID=U2S159_9FIRM
Peptidase, M23 family {ECO:0000313|EMBL:ERK56547.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative metalloendopeptidase
L2_059_256G1_scaffold_240_23
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18752..19933)
DNA (1182bp) protein (394aa)
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases (EC:3.4.17.11)
Peptidase dimerization domain protein n=2 Tax=Oscillibacter RepID=U2R7J6_9FIRM
Peptidase dimerization domain protein {ECO:0000313|EMBL:ERK56548.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_059_256G1_scaffold_240_24
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19944..20957)
DNA (1014bp) protein (338aa)
NMT1/THI5-like protein n=2 Tax=Oscillibacter RepID=U2QK31_9FIRM
NMT1/THI5-like protein {ECO:0000313|EMBL:ERK56549.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
L2_059_256G1_scaffold_240_25
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21022..21777)
DNA (756bp) protein (252aa)
ABC transporter, permease protein n=2 Tax=Oscillibacter RepID=U2Q1D1_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:ERK56550.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
L2_059_256G1_scaffold_240_26
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21774..22529)
DNA (756bp) protein (252aa)
ABC transporter, ATP-binding protein n=2 Tax=Oscillibacter RepID=U2QJ95_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK56551.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L2_059_256G1_scaffold_240_27
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22532..23191)
DNA (660bp) protein (220aa)
Putative transcription activator (EC:3.5.99.2)
TENA/THI-4 family protein n=2 Tax=Oscillibacter RepID=U2S164_9FIRM
TENA/THI-4 family protein {ECO:0000313|EMBL:ERK56552.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_059_256G1_scaffold_240_28
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23475..24407)
DNA (933bp) protein (311aa)
Kinase, PfkB family n=2 Tax=Oscillibacter RepID=U2R7K0_9FIRM
Kinase, PfkB family {ECO:0000313|EMBL:ERK56553.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative GTPase, G3E family
L2_059_256G1_scaffold_240_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24564..25856)
DNA (1293bp) protein (431aa)
ROK family protein n=2 Tax=Oscillibacter RepID=U2QK36_9FIRM
ROK family protein {ECO:0000313|EMBL:ERK56554.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ROK family protein
L2_059_256G1_scaffold_240_30
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25874..26656)
DNA (783bp) protein (261aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2Q1D3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK56555.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Predicted membrane protein
Displaying items 1-30 of 48 in total

View Taxonomy