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L2_059_256G1_scaffold_242

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_242_1
unknown

Not on your lists

comp(30..446)
DNA (417bp) protein (139aa)

This feature has no annotations

L2_059_256G1_scaffold_242_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(413..1771)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3Q9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78021.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_256G1_scaffold_242_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1784..2269)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78022.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_256G1_scaffold_242_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2266..2475)
DNA (210bp) protein (70aa)
Transcriptional regulator XRE family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIF6_9FIRM
Transcriptional regulator XRE family {ECO:0000313|EMBL:CCZ78023.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
XRE family transcriptional regulator
L2_059_256G1_scaffold_242_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2663..3760
DNA (1098bp) protein (366aa)
Glycerol dehydrogenase and related enzymes (EC:1.1.1.6)
3-dehydroquinate synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQK4_9FIRM
3-dehydroquinate synthase {ECO:0000313|EMBL:CCZ78024.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_059_256G1_scaffold_242_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3761..4954
DNA (1194bp) protein (398aa)
Uncharacterized membrane protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ58_9FIRM
Uncharacterized membrane protein {ECO:0000313|EMBL:CCZ78025.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized membrane protein
L2_059_256G1_scaffold_242_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5046..5858
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3R2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78026.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_059_256G1_scaffold_242_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5911..6384)
DNA (474bp) protein (158aa)
Uncharacterized conserved protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBF8_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CCZ78027.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_256G1_scaffold_242_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6381..7250)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78028.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_256G1_scaffold_242_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7272..8549)
DNA (1278bp) protein (426aa)
Uncharacterized conserved protein related to MYG1 family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQK8_9FIRM
Uncharacterized conserved protein related to MYG1 family {ECO:0000313|EMBL:CCZ78029.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized conserved protein related to MYG1 family
L2_059_256G1_scaffold_242_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9260..10216)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79463.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_256G1_scaffold_242_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10351..11460)
DNA (1110bp) protein (370aa)
Transcriptional regulator GntR family n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFG7_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CCZ79462.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
araR; AraR
L2_059_256G1_scaffold_242_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11488..12459)
DNA (972bp) protein (324aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7P3_9FIRM
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CCZ79461.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC transporter
L2_059_256G1_scaffold_242_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12470..13969)
DNA (1500bp) protein (500aa)
ABC transporter ATP-binding protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMZ8_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ79460.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
monosaccharide ABC transporter ATP-binding protein, CUT2 family
L2_059_256G1_scaffold_242_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13989..14939)
DNA (951bp) protein (317aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUR6_9FIRM
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CCZ79459.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
inner-membrane translocator
L2_059_256G1_scaffold_242_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15031..16200)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79458.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
LacI family transcriptional regulator
L2_059_256G1_scaffold_242_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16626..16862
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79457.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_256G1_scaffold_242_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16975..18555)
DNA (1581bp) protein (527aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7N6_9FIRM
L2_059_256G1_scaffold_242_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18735..19823
DNA (1089bp) protein (363aa)
Signaling protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMY9_9FIRM
Signaling protein {ECO:0000313|EMBL:CCZ79455.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
signaling protein
L2_059_256G1_scaffold_242_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19826..20887)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79454.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_256G1_scaffold_242_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21028..21588)
DNA (561bp) protein (187aa)
Putative flavoredoxin n=1 Tax=Roseburia sp. CAG:18 RepID=R5UME5_9FIRM
Putative flavoredoxin {ECO:0000313|EMBL:CCZ79453.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flavoredoxin
L2_059_256G1_scaffold_242_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22148..23359)
DNA (1212bp) protein (404aa)
ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFF5_9FIRM
ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components {ECO:0000313|EMBL:CCZ79452.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ferric enterobactin transport ATP-binding protein fepC
L2_059_256G1_scaffold_242_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23452..24504)
DNA (1053bp) protein (351aa)
ABC-type Fe3+-siderophore transport system permease component n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7M9_9FIRM
ABC-type Fe3+-siderophore transport system permease component {ECO:0000313|EMBL:CCZ79451.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type Fe3+-siderophore transport system, permease component
L2_059_256G1_scaffold_242_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24563..26065)
DNA (1503bp) protein (501aa)
Putative ferrichrome-binding periplasmic protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMY2_9FIRM
Putative ferrichrome-binding periplasmic protein {ECO:0000313|EMBL:CCZ79450.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type Fe3+-hydroxamate transport system, periplasmic component
L2_059_256G1_scaffold_242_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26078..27688)
DNA (1611bp) protein (537aa)
Heme-binding protein FetB n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUQ6_9FIRM
Heme-binding protein FetB {ECO:0000313|EMBL:CCZ79449.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Cobalamin biosynthesis protein CbiK, Co2+ chelatase
L2_059_256G1_scaffold_242_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28430..29395)
DNA (966bp) protein (322aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Sugar kinases ribokinase family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMD9_9FIRM
Sugar kinases ribokinase family {ECO:0000313|EMBL:CCZ79448.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_059_256G1_scaffold_242_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29411..30295)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79447.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sugar phosphate isomerase/epimerase
L2_059_256G1_scaffold_242_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30312..31310)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7M1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79446.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components
L2_059_256G1_scaffold_242_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31313..32323)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79445.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components
L2_059_256G1_scaffold_242_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32339..33826)
DNA (1488bp) protein (496aa)
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) (EC:3.6.3.17)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79444.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Displaying items 1-30 of 67 in total

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