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L2_059_256G1_scaffold_256

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_256_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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186..533
DNA (348bp) protein (116aa)
Anti-sigma factor antagonist n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN61_9FIRM
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
putative anti-sigma-factor antagonist
L2_059_256G1_scaffold_256_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

616..1023
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7Y6_9FIRM
Anti-sigma regulatory factor {ECO:0000313|EMBL:CDD78826.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_059_256G1_scaffold_256_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1390..2679
DNA (1290bp) protein (430aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7Y5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78824.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Putative virion core protein (lumpy skin disease virus)
L2_059_256G1_scaffold_256_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2698..3792
DNA (1095bp) protein (365aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7Y4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78436.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_059_256G1_scaffold_256_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3808..4650
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Y3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78435.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_059_256G1_scaffold_256_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4937..5713
DNA (777bp) protein (259aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7Y2_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L2_059_256G1_scaffold_256_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5776..6516
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Y1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78433.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC transporter-like protein
L2_059_256G1_scaffold_256_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6586..7680
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Y0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78432.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_059_256G1_scaffold_256_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7743..8849
DNA (1107bp) protein (369aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7X9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78817.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
glycosyltransferase
L2_059_256G1_scaffold_256_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8857..9891
DNA (1035bp) protein (345aa)
wcwK; Capsular polysaccharide phosphotransferase WcwK (EC:2.7.-.-)
Capsular polysaccharide phosphotransferase wcwK n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLD3_9FIRM
Capsular polysaccharide phosphotransferase wcwK {ECO:0000313|EMBL:CDD78816.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_059_256G1_scaffold_256_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9872..11131
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78815.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
L2_059_256G1_scaffold_256_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11192..11608
DNA (417bp) protein (139aa)
Glycerol-3-phosphate cytidylyltransferase n=2 Tax=Ruminococcus RepID=C6J7X6_9FIRM
Glycerol-3-phosphate cytidylyltransferase {ECO:0000313|EMBL:CDD78814.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
glycerol-3-phosphate cytidyltransferase
L2_059_256G1_scaffold_256_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11619..12908
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78813.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
L2_059_256G1_scaffold_256_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13116..16004
DNA (2889bp) protein (963aa)
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLD0_9FIRM
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase {ECO:0000313|EMBL:CDD78811.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
L2_059_256G1_scaffold_256_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16144..16923)
DNA (780bp) protein (260aa)
RNA polymerase sigma factor n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7X2_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
RNA polymerase, sigma subunit, RpsG/SigG
L2_059_256G1_scaffold_256_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17143..17397)
DNA (255bp) protein (85aa)
YlmC/YmxH family sporulation protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7X1_9FIRM
YlmC/YmxH family sporulation protein {ECO:0000313|EMBL:EES78423.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
sporulation protein, YlmC/YmxH family
L2_059_256G1_scaffold_256_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17678..18127
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR n=2 Tax=Ruminococcus RepID=C6J7X0_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcriptional regulator NrdR
L2_059_256G1_scaffold_256_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18266..19600)
DNA (1335bp) protein (445aa)
Glutamate dehydrogenase/leucine dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=2 Tax=Ruminococcus RepID=C6J7W9_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_059_256G1_scaffold_256_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20191..21552
DNA (1362bp) protein (454aa)
Citrate synthase (EC:2.3.3.1 2.3.3.5)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7W8_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_059_256G1_scaffold_256_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21647..22150
DNA (504bp) protein (168aa)
HAD phosphatase, family IIIA n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7W7_9FIRM
HAD phosphatase, family IIIA {ECO:0000313|EMBL:EES78419.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
L2_059_256G1_scaffold_256_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22147..22671
DNA (525bp) protein (175aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7W6_9FIRM
L2_059_256G1_scaffold_256_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22815..23372
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7W5_9FIRM
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
translation elongation factor P (EF-P)
L2_059_256G1_scaffold_256_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23490..24497
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78416.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted oxidoreductases of the aldo/keto reductase family
L2_059_256G1_scaffold_256_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25439..26119
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7V9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78492.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_059_256G1_scaffold_256_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26116..27660
DNA (1545bp) protein (515aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7V8_9FIRM
Signal transduction histidine kinase
L2_059_256G1_scaffold_256_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27906..28544
DNA (639bp) protein (213aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=2 Tax=Ruminococcus RepID=C6J7V6_9FIRM
L2_059_256G1_scaffold_256_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28546..29304
DNA (759bp) protein (253aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
imidazoleglycerol phosphate synthase, cyclase subunit (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7V5_9FIRM
L2_059_256G1_scaffold_256_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29336..30010
DNA (675bp) protein (225aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase n=2 Tax=Ruminococcus RepID=C6J7V4_9FIRM
L2_059_256G1_scaffold_256_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30056..31684
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7V3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78405.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L2_059_256G1_scaffold_256_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31912..36153)
DNA (4242bp) protein (1414aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78486.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
CoA-substrate-specific enzyme activase, putative
Displaying items 1-30 of 37 in total

View Taxonomy