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L2_059_256G1_scaffold_290

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_290_1
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(219..1559)
DNA (1341bp) protein (447aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
Ribosomal protein S12 methylthiotransferase RimO n=2 Tax=Burkholderiales RepID=D9Y3R9_9BURK
30S ribosomal protein S12 methylthiotransferase RimO
L2_059_256G1_scaffold_290_2
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1564..1902)
DNA (339bp) protein (113aa)
Rhodanese-like protein n=3 Tax=Burkholderiales RepID=D9Y3R8_9BURK
Rhodanese-like protein {ECO:0000313|EMBL:EGG54946.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
Rhodanese-like protein
L2_059_256G1_scaffold_290_3
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1895..2479)
DNA (585bp) protein (195aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=D9Y3R7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CCX87051.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
L2_059_256G1_scaffold_290_4
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2454..3227)
DNA (774bp) protein (258aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=D9Y3R6_9BURK
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
hypothetical protein
L2_059_256G1_scaffold_290_5
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3239..4423)
DNA (1185bp) protein (395aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
rluD; pseudouridine synthase (EC:4.2.1.70)
Pseudouridine synthase n=3 Tax=Burkholderiales RepID=F3QK03_9BURK
L2_059_256G1_scaffold_290_6
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4440..5291
DNA (852bp) protein (284aa)
Outer membrane protein assembly factor BamD n=3 Tax=Burkholderiales RepID=D9Y3R4_9BURK
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
outer membrane assembly lipoprotein YfiO
L2_059_256G1_scaffold_290_7
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5301..5858
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=D9Y3R3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFL83609.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
L2_059_256G1_scaffold_290_8
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5960..6760
DNA (801bp) protein (267aa)
Putative L-aspartate dehydrogenase n=3 Tax=Burkholderiales RepID=D9Y3R2_9BURK
Putative L-aspartate dehydrogenase {ECO:0000313|EMBL:CCX87039.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
L-aspartate dehydrogenase
L2_059_256G1_scaffold_290_9
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6828..8825)
DNA (1998bp) protein (666aa)
ATP-dependent helicase n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5EE47_9BURK
ATP-dependent helicase {ECO:0000313|EMBL:CCX87037.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
ATP-dependent helicase
L2_059_256G1_scaffold_290_10
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8889..9656)
DNA (768bp) protein (256aa)
Conserved domain protein n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5E3F3_9BURK
Conserved domain protein {ECO:0000313|EMBL:CCX87035.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
hypothetical protein
L2_059_256G1_scaffold_290_11
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9736..11169)
DNA (1434bp) protein (478aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
dihydrolipoyl dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=2 Tax=Parasutterella RepID=F3QK09_9BURK
L2_059_256G1_scaffold_290_12
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11180..12478)
DNA (1299bp) protein (433aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex (EC:2.3.1.61)
Dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex n=2 Tax=Parasutterella RepID=F3QK10_9BURK
L2_059_256G1_scaffold_290_13
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12518..15448)
DNA (2931bp) protein (977aa)
sucA; 2-oxoglutarate dehydrogenase (EC:1.2.4.2)
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QK11_9BURK
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component {ECO:0000313|EMBL:EGG54957.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
L2_059_256G1_scaffold_290_14
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15715..16128
DNA (414bp) protein (138aa)
DoxX family protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y3Q6_9BURK
DoxX family protein {ECO:0000313|EMBL:EFL83602.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
L2_059_256G1_scaffold_290_15
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16346..17425
DNA (1080bp) protein (360aa)
DNA-methyltransferase (dcm) (EC:2.1.1.37)
Putative modification methylase HpaII n=2 Tax=root RepID=R6URJ1_9CLOT
Putative modification methylase HpaII {ECO:0000313|EMBL:CDC82811.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
L2_059_256G1_scaffold_290_16
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17495..17950
DNA (456bp) protein (152aa)
DNA mismatch endonuclease Vsr n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QLA6_9BURK
DNA mismatch endonuclease Vsr {ECO:0000313|EMBL:EGG53418.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
DNA mismatch endonuclease Vsr
L2_059_256G1_scaffold_290_17
Acholeplasma sp. CAG:878, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(17972..20602)
DNA (2631bp) protein (877aa)
Uncharacterized protein n=1 Tax=Acholeplasma sp. CAG:878 RepID=R5HF64_9MOLU
Uncharacterized protein {ECO:0000313|EMBL:CCY28153.1}; TaxID=1262686 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma; environmental samples.;" source="Acholeplasma sp. CAG:878.;"
hypothetical protein
L2_059_256G1_scaffold_290_18
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20599..21540)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NYV9_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI09755.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
L2_059_256G1_scaffold_290_19
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21521..23524)
DNA (2004bp) protein (668aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI00031E4BCE
Endonuclease {ECO:0000313|EMBL:ETI96940.1}; Flags: Fragment;; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
endonuclease
L2_059_256G1_scaffold_290_20
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23532..24281)
DNA (750bp) protein (250aa)
Z1 domain-containing protein n=2 Tax=Megasphaera RepID=S7HJG9_9FIRM
Z1 domain-containing protein {ECO:0000313|EMBL:EPP15877.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Endonuclease
L2_059_256G1_scaffold_290_21
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24291..25733)
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MN84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72584.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
ATP-binding protein
L2_059_256G1_scaffold_290_22
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

26248..26895
DNA (648bp) protein (216aa)
Carbonate dehydratase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AF38_9PROT
Carbonate dehydratase {ECO:0000313|EMBL:CDA45176.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
carbonate dehydratase
L2_059_256G1_scaffold_290_23
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26990..27460)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5E3D9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CCX87015.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
L2_059_256G1_scaffold_290_24
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(27556..28629)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A8H3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA45174.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hypothetical protein
L2_059_256G1_scaffold_290_25
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28734..29333)
DNA (600bp) protein (200aa)
Transcriptional regulator, TetR family n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y3P6_9BURK
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFL83592.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
transcriptional regulator
L2_059_256G1_scaffold_290_26
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29700..31223
DNA (1524bp) protein (508aa)
Flavocytochrome c n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y3P5_9BURK
Flavocytochrome c {ECO:0000313|EMBL:EFL83591.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
flavocytochrome c flavin subunit
L2_059_256G1_scaffold_290_27
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31608..33260
DNA (1653bp) protein (551aa)
Phenylalanine and histidine ammonia-lyase n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QK18_9BURK
Phenylalanine and histidine ammonia-lyase {ECO:0000313|EMBL:EGG54964.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
phenylalanine/histidine ammonia-lyase family protein
L2_059_256G1_scaffold_290_28
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33414..34466
DNA (1053bp) protein (351aa)
Gram-negative porin n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y3P2_9BURK
Gram-negative porin {ECO:0000313|EMBL:EFL83588.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
outer membrane porin protein
L2_059_256G1_scaffold_290_29
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34676..34981
DNA (306bp) protein (102aa)
DNA-binding helix-turn-helix protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y3P1_9BURK
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFL83587.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
putative DNA-binding protein
L2_059_256G1_scaffold_290_30
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34986..35750
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y3P0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFL83586.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
hypothetical protein
Displaying items 1-30 of 39 in total

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