ggKbase home page

L2_059_256G1_scaffold_310

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_310_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

115..996
DNA (882bp) protein (294aa)
Site-specific recombinase, phage integrase family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNK6_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDP20764.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Site-specific recombinase XerD
L2_059_256G1_scaffold_310_2
unknown

Not on your lists

comp(825..1172)
DNA (348bp) protein (116aa)

This feature has no annotations

L2_059_256G1_scaffold_310_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1339..1743)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K7K4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00817.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_059_256G1_scaffold_310_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2312..3685)
DNA (1374bp) protein (458aa)
Transporter n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNK9_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Na+-dependent transporters of the SNF family
L2_059_256G1_scaffold_310_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3847..5139)
DNA (1293bp) protein (431aa)
TRAP transporter, DctM subunit n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNL1_9FIRM
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EFQ05255.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
TRAP transporter subunit DctM
L2_059_256G1_scaffold_310_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5164..5619)
DNA (456bp) protein (152aa)
TRAP transporter, DctQ-like membrane protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNL2_9FIRM
TRAP transporter, DctQ-like membrane protein {ECO:0000313|EMBL:EFQ05256.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
TRAP-type C4-dicarboxylate transport system, small permease component
L2_059_256G1_scaffold_310_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5811..6911)
DNA (1101bp) protein (367aa)
TRAP transporter solute receptor, DctP family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNL4_9FIRM
TRAP transporter solute receptor, DctP family {ECO:0000313|EMBL:EFQ05258.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
TRAP dicarboxylate family transporter subunit DctP
L2_059_256G1_scaffold_310_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7304..7993
DNA (690bp) protein (230aa)
Transcriptional regulator, GntR family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNL5_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFQ05259.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Transcriptional regulators
L2_059_256G1_scaffold_310_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8064..9557)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05260.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_059_256G1_scaffold_310_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9922..11847)
DNA (1926bp) protein (642aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNL7_9FIRM
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EFQ05261.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4)
L2_059_256G1_scaffold_310_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11896..12801)
DNA (906bp) protein (302aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
fructose-1-phosphate kinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNL8_9FIRM
L2_059_256G1_scaffold_310_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12798..13553)
DNA (756bp) protein (252aa)
Transcriptional regulator, DeoR family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNL9_9FIRM
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EFQ05263.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Transcriptional regulators of sugar metabolism
L2_059_256G1_scaffold_310_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13817..14881)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05264.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L2_059_256G1_scaffold_310_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15100..15780
DNA (681bp) protein (227aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNM2_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EFQ05266.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L2_059_256G1_scaffold_310_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15949..16929
DNA (981bp) protein (327aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFQ05267.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFQ05267.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNM3_9FIRM
Glycosyltransferases involved in cell wall biogenesis
L2_059_256G1_scaffold_310_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16926..17510
DNA (585bp) protein (195aa)
Flavin reductase-like protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNM4_9FIRM
Flavin reductase-like protein {ECO:0000313|EMBL:EFQ05268.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
L2_059_256G1_scaffold_310_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17851..18783)
DNA (933bp) protein (311aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNM6_9FIRM
L2_059_256G1_scaffold_310_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18944..20218)
DNA (1275bp) protein (425aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNM7_9FIRM
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:EFQ05271.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_059_256G1_scaffold_310_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20447..21103)
DNA (657bp) protein (219aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNM8_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFQ05272.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ABC-type metal ion transport system, permease component
L2_059_256G1_scaffold_310_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21100..22113)
DNA (1014bp) protein (338aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNM9_9FIRM
ABC-type metal ion transport system, ATPase component
L2_059_256G1_scaffold_310_21
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22264..23184)
DNA (921bp) protein (307aa)
ABC-type metal ion transport system periplasmic component/surface antigen n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q0V8_9FIRM
ABC-type metal ion transport system periplasmic component/surface antigen {ECO:0000313|EMBL:CDC30348.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ABC-type metal ion transport system, periplasmic component/surface antigen
L2_059_256G1_scaffold_310_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23722..24513
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05275.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_059_256G1_scaffold_310_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24510..24959
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05276.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_059_256G1_scaffold_310_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25194..25736)
DNA (543bp) protein (181aa)
TAT (Twin-arginine translocation) pathway signal sequence n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K858_9FIRM
TAT (twin-arginine translocation) pathway signal sequence.
TAT (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:CBL01021.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_059_256G1_scaffold_310_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25956..26504)
DNA (549bp) protein (183aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNN4_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFQ05278.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
TAT (twin-arginine translocation) pathway signal sequence.
L2_059_256G1_scaffold_310_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26497..26745)
DNA (249bp) protein (83aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNN5_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFQ05279.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_059_256G1_scaffold_310_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26752..26877)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05280.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_059_256G1_scaffold_310_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27057..27632
DNA (576bp) protein (192aa)
Nitroreductase family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNN7_9FIRM
Nitroreductase family protein {ECO:0000313|EMBL:EFQ05281.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Nitroreductase
L2_059_256G1_scaffold_310_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27829..28668
DNA (840bp) protein (280aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNN8_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFQ05282.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L2_059_256G1_scaffold_310_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28778..29542
DNA (765bp) protein (255aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNN9_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFQ05283.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)
Displaying items 1-30 of 41 in total

View Taxonomy