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L2_059_256G1_scaffold_317

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_317_1
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..687
DNA (687bp) protein (229aa)
Putative DNA replication protein DnaC n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZB95_9CLOT
Putative DNA replication protein DnaC {ECO:0000313|EMBL:CDD43470.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
replicative DNA helicase loader DnaI
L2_059_256G1_scaffold_317_2
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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748..1929
DNA (1182bp) protein (394aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZR01_9CLOT
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:CDD43471.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_059_256G1_scaffold_317_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2074..3126
DNA (1053bp) protein (351aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases n=1 Tax=Clostridium sp. CAG:299 RepID=R7ALM3_9CLOT
Threonine dehydrogenase and related Zn-dependent dehydrogenases {ECO:0000313|EMBL:CDD43472.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases
L2_059_256G1_scaffold_317_4
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3217..5091)
DNA (1875bp) protein (625aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YPD9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37843.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_059_256G1_scaffold_317_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5095..6165)
DNA (1071bp) protein (357aa)
Ser/Thr phosphatase family protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7A506_9CLOT
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDD37842.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
metallophosphoesterase
L2_059_256G1_scaffold_317_6
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6335..7726)
DNA (1392bp) protein (464aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZAA8_9CLOT
L2_059_256G1_scaffold_317_7
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8106..9380
DNA (1275bp) protein (425aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YVA8_9CLOT
L2_059_256G1_scaffold_317_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9377..10498
DNA (1122bp) protein (374aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|SAAS:SAAS00083544}; EC=2.7.7.27 {ECO:0000256|SAAS:SAAS00083544};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
glucose-1-phosphate adenylyltransferase, GlgD subunit (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase GlgD subunit n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z2K7_9CLOT
L2_059_256G1_scaffold_317_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10558..10848
DNA (291bp) protein (97aa)
Putative septation protein SpoVG n=1 Tax=Clostridium sp. CAG:299 RepID=R6YPD2_9CLOT
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Uncharacterized protein, involved in the regulation of septum location
L2_059_256G1_scaffold_317_10
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10996..11880)
DNA (885bp) protein (295aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:299 RepID=R7A4Z8_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CDD37837.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
transcriptional regulator, LysR family
L2_059_256G1_scaffold_317_11
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12210..13508
DNA (1299bp) protein (433aa)
UPF0597 protein BN593_01162 n=1 Tax=Clostridium sp. CAG:299 RepID=R7A8V9_9CLOT
UPF0597 protein BN593_01162 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_059_256G1_scaffold_317_12
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14052..16109
DNA (2058bp) protein (686aa)
Endonuclease MutS2 {ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00084246};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YT50_9CLOT
DNA mismatch repair protein MutS domain-containing protein
L2_059_256G1_scaffold_317_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16205..16753)
DNA (549bp) protein (183aa)
Transcriptional regulator AbrB family n=1 Tax=Clostridium sp. CAG:299 RepID=R6YXV0_9CLOT
Transcriptional regulator AbrB family {ECO:0000313|EMBL:CDD40913.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
transcriptional regulator, AbrB family
L2_059_256G1_scaffold_317_14
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16842..17105)
DNA (264bp) protein (88aa)
Txe/YoeB family addiction module toxin n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JKZ1_9FIRM
Txe/YoeB family addiction module toxin {ECO:0000313|EMBL:EGN30962.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
toxin-antitoxin system, toxin component, Txe/YoeB family
L2_059_256G1_scaffold_317_15
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17098..17364)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JKZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30961.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Antitoxin of toxin-antitoxin stability system
L2_059_256G1_scaffold_317_16
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17575..18030
DNA (456bp) protein (152aa)
MazG family protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z3W6_9CLOT
MazG family protein {ECO:0000313|EMBL:CDD40905.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain
L2_059_256G1_scaffold_317_17
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18166..18441
DNA (276bp) protein (92aa)
Bacterial nucleoid DNA-binding protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AM97_9CLOT
Bacterial nucleoid DNA-binding protein {ECO:0000313|EMBL:CDD43722.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Bacterial nucleoid DNA-binding protein
L2_059_256G1_scaffold_317_18
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18446..18685
DNA (240bp) protein (80aa)
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) n=4 Tax=Clostridiales RepID=D4MP99_9FIRM
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) {ECO:0000313|EMBL:CBK75982.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_059_256G1_scaffold_317_19
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18748..19032
DNA (285bp) protein (95aa)
Sporulation protein YabP n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZJX1_9CLOT
sporulation protein YabP
Sporulation protein YabP {ECO:0000313|EMBL:CDD43714.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_059_256G1_scaffold_317_20
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19043..19369
DNA (327bp) protein (109aa)
Spore cortex protein YabQ (Spore_YabQ) n=1 Tax=Clostridium sp. CAG:299 RepID=R7AM88_9CLOT
Spore cortex protein YabQ (Spore_YabQ) {ECO:0000313|EMBL:CDD43712.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Spore cortex protein YabQ (Spore_YabQ).
L2_059_256G1_scaffold_317_21
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19389..19709
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZBZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD43710.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Septum formation initiator.
L2_059_256G1_scaffold_317_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19814..21223
DNA (1410bp) protein (470aa)
Stage II sporulation protein E (SpoIIE). (EC:3.1.3.16)
Stage II sporulation protein E (SpoIIE) n=1 Tax=Clostridium sp. CAG:299 RepID=R7AM84_9CLOT
Stage II sporulation protein E (SpoIIE) {ECO:0000313|EMBL:CDD43707.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_059_256G1_scaffold_317_23
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21304..22740
DNA (1437bp) protein (479aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZBZ0_9CLOT
L2_059_256G1_scaffold_317_24
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22733..23257
DNA (525bp) protein (175aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZJW2_9CLOT
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CDD43704.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_059_256G1_scaffold_317_25
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23270..25114
DNA (1845bp) protein (615aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Clostridium RepID=R5MM01_9CLOT
L2_059_256G1_scaffold_317_26
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

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25476..27584
DNA (2109bp) protein (703aa)
Glycosidases (EC:3.2.1.20)
Glycosidases {ECO:0000313|EMBL:CBL35578.1}; EC=3.2.1.20 {ECO:0000313|EMBL:CBL35578.1};; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
Glycosidases n=1 Tax=butyrate-producing bacterium SM4/1 RepID=D4MP92_9FIRM
L2_059_256G1_scaffold_317_27
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28107..29648
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZA43_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45248.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_059_256G1_scaffold_317_28
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29658..30350)
DNA (693bp) protein (231aa)
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase activating protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZVY7_9CLOT
Anaerobic ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:CDD45246.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_059_256G1_scaffold_317_29
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30501..31004
DNA (504bp) protein (168aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Clostridium sp. CAG:299 PF7_9CLOT">RepID=R6ZPF7_9CLOT
Cytosine/adenosine deaminases
L2_059_256G1_scaffold_317_30
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31077..31700)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7ARJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45242.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Rubrerythrin
Displaying items 1-30 of 37 in total

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