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L2_059_256G1_scaffold_332

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_332_1
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..319)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HQC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30349.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
flagellar motor switch protein FliM
L2_059_256G1_scaffold_332_2
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(346..861)
DNA (516bp) protein (172aa)
Flagellar basal body-associated protein FliL n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQF5_9FIRM
Flagellar basal body-associated protein FliL {ECO:0000313|EMBL:EEG95177.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Flagellar basal body-associated protein FliL.
L2_059_256G1_scaffold_332_3
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(885..1697)
DNA (813bp) protein (271aa)
OmpA family protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQF4_9FIRM
OmpA family protein {ECO:0000313|EMBL:EEG95176.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
chemotaxis protein MotB
L2_059_256G1_scaffold_332_4
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1697..2497)
DNA (801bp) protein (267aa)
Transporter, MotA/TolQ/ExbB proton channel family protein n=2 Tax=Roseburia RepID=C0FQF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30346.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
motility protein A
L2_059_256G1_scaffold_332_5
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2535..2744)
DNA (210bp) protein (70aa)
Flagellar protein (FlbD) n=2 Tax=Roseburia RepID=C0FQF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30345.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Uncharacterized protein, possibly involved in motility
L2_059_256G1_scaffold_332_6
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2920..4563)
DNA (1644bp) protein (548aa)
Flagellar hook-basal body protein n=2 Tax=Roseburia RepID=C0FQF1_9FIRM
Flagellar hook-basal body protein {ECO:0000313|EMBL:EEG95173.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
fagellar hook-basal body proteins
L2_059_256G1_scaffold_332_7
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4650..5048)
DNA (399bp) protein (133aa)
Flagellar operon protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I3F9_9FIRM
Flagellar operon protein {ECO:0000313|EMBL:CCY31326.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
flagellar operon protein
L2_059_256G1_scaffold_332_8
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5063..5968)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I2U8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31327.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Flagellar hook capping protein
L2_059_256G1_scaffold_332_9
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5991..7472)
DNA (1482bp) protein (494aa)
Flagellar hook-length control protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQE6_9FIRM
Flagellar hook-length control protein {ECO:0000313|EMBL:EEG95168.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Flagellar hook-length control protein
L2_059_256G1_scaffold_332_10
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7552..8415)
DNA (864bp) protein (288aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R5HT58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31329.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L2_059_256G1_scaffold_332_11
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8444..8899)
DNA (456bp) protein (152aa)
Flagellar export protein FliJ n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HNN3_9FIRM
Flagellar export protein FliJ {ECO:0000313|EMBL:CCY31330.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
flagellar export protein FliJ
L2_059_256G1_scaffold_332_12
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8913..10223)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I3G4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31331.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Na+-transporting two-sector ATPase
L2_059_256G1_scaffold_332_13
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10236..11027)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I2V2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31332.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
flagellar biosynthesis/type III secretory pathway protein
L2_059_256G1_scaffold_332_14
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11020..12027)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HNQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31333.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
flagellar motor switch protein FliG
L2_059_256G1_scaffold_332_15
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12031..13635)
DNA (1605bp) protein (535aa)
Flagellar M-ring protein FliF n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQD8_9FIRM
Flagellar M-ring protein FliF {ECO:0000313|EMBL:EEG95160.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF)
L2_059_256G1_scaffold_332_16
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13655..13966)
DNA (312bp) protein (104aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQD7_9FIRM
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
flagellar hook-basal body complex protein FliE
L2_059_256G1_scaffold_332_17
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14001..14441)
DNA (441bp) protein (147aa)
Flagellar basal-body rod protein FlgC n=2 Tax=Roseburia RepID=C0FQD6_9FIRM
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
flagellar basal body rod protein
L2_059_256G1_scaffold_332_18
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14471..14866)
DNA (396bp) protein (132aa)
Flagellar basal body rod protein FlgB n=2 Tax=Roseburia RepID=C0FQD5_9FIRM
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
flagellar basal-body rod protein FlgB
L2_059_256G1_scaffold_332_19
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15384..15890)
DNA (507bp) protein (169aa)
DNA topoisomerase n=2 Tax=Roseburia RepID=C0FQD4_9FIRM
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000256|HAMAP-Rule:MF_00621, ECO:0000256|SAAS:SAAS00044533}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Pleiotropic transcriptional repressor
L2_059_256G1_scaffold_332_20
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15976..18057)
DNA (2082bp) protein (694aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HT66_9FIRM
L2_059_256G1_scaffold_332_21
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18076..19155)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HNP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31340.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
putative Rossmann fold nucleotide-binding protein involved in DNA uptake
L2_059_256G1_scaffold_332_22
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19152..20678)
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I3H2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31341.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
putative ATPase with chaperone activity
L2_059_256G1_scaffold_332_23
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20879..21496)
DNA (618bp) protein (206aa)
RNA polymerase sigma factor n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I2W3_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
sporulation sigma factor SigK
L2_059_256G1_scaffold_332_24
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21619..22515
DNA (897bp) protein (299aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
pseudouridine synthase, RluA family (EC:5.4.99.12)
Pseudouridine synthase, RluA family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQD0_9FIRM
L2_059_256G1_scaffold_332_25
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22510..23124)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HT70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31344.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L2_059_256G1_scaffold_332_26
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23137..25011)
DNA (1875bp) protein (625aa)
Type II secretory pathway, pullulanase PulA and related glycosidases (EC:3.2.1.-)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HNP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31345.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L2_059_256G1_scaffold_332_27
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25190..26275
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I3H7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31346.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
two-component system response regulator
L2_059_256G1_scaffold_332_28
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26300..26617
DNA (318bp) protein (106aa)
UPF0473 protein ROSEINA2194_00930 n=2 Tax=Roseburia RepID=C0FQC6_9FIRM
UPF0473 protein BN501_00718 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Protein of unknown function (DUF1292).
L2_059_256G1_scaffold_332_29
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26674..28509)
DNA (1836bp) protein (612aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
UvrD/REP helicase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQC5_9FIRM
L2_059_256G1_scaffold_332_30
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28520..29974)
DNA (1455bp) protein (485aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
glutamyl-tRNA synthetase, bacterial family (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HT75_9FIRM
Displaying items 1-30 of 41 in total

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