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L2_059_256G1_scaffold_383

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_383_1
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..736
DNA (735bp) protein (245aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
argG; argininosuccinate synthase ArgG (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKU9_9CLOT
L2_059_256G1_scaffold_383_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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738..2138
DNA (1401bp) protein (467aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Argininosuccinate lyase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJP3_9CLOT
argininosuccinate lyase
L2_059_256G1_scaffold_383_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2126..3160
DNA (1035bp) protein (345aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
argC; N-acetyl-gamma-glutamyl-phosphate reductase ArgC (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJL0_9CLOT
L2_059_256G1_scaffold_383_4
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3179..4408
DNA (1230bp) protein (410aa)
argJ; arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1 2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKG8_9CLOT
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L2_059_256G1_scaffold_383_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4491..5345
DNA (855bp) protein (285aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
argB; acetylglutamate kinase ArgB (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJS8_9CLOT
L2_059_256G1_scaffold_383_6
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5368..6546
DNA (1179bp) protein (393aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
argD; acetylornithine aminotransferase ArgD (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKV4_9CLOT
L2_059_256G1_scaffold_383_7
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6569..7492
DNA (924bp) protein (308aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
argF; ornithine carbamoyltransferase ArgF (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJP8_9CLOT
L2_059_256G1_scaffold_383_8
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7865..8299)
DNA (435bp) protein (145aa)
Glycosyl hydrolase family 32 domain protein n=1 Tax=Pelosinus fermentans JBW45 RepID=I9NKT3_9FIRM
Beta-fructosidase, levanase/invertase {ECO:0000313|EMBL:EKQ57158.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
putative glycosyl hydrolase family 32
L2_059_256G1_scaffold_383_9
Enterococcus saccharolyticus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(8465..9064)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Enterococcus saccharolyticus ATCC 43076 RepID=S0NRQ6_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOT30024.1}; TaxID=1139996 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus saccharolyticus ATCC 43076.;"
putative glycosyl hydrolase family 32
L2_059_256G1_scaffold_383_10
unknown

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comp(9024..9176)
DNA (153bp) protein (51aa)

This feature has no annotations

L2_059_256G1_scaffold_383_11
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9283..10209)
DNA (927bp) protein (309aa)
scrK; fructokinase (EC:2.7.1.4)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y2Z4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ02539.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
L2_059_256G1_scaffold_383_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10228..11700)
DNA (1473bp) protein (491aa)
Sucrose-6-phosphate hydrolase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YX27_CLOBU
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:ENZ32156.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
sucrose-6-phosphate hydrolase
L2_059_256G1_scaffold_383_13
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11785..13380)
DNA (1596bp) protein (532aa)
Extracellular solute-binding protein family 1 n=1 Tax=Clostridium sp. CAG:221 RepID=R6GM42_9CLOT
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDB15237.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
extracellular solute-binding protein
L2_059_256G1_scaffold_383_14
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13399..14295)
DNA (897bp) protein (299aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=environmental samples RepID=R6FPS8_9CLOT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDB76084.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
binding-protein-dependent transport system inner membrane protein
L2_059_256G1_scaffold_383_15
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14308..15297)
DNA (990bp) protein (330aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium sp. CAG:221 RepID=R6G120_9CLOT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDB15239.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
binding-protein-dependent transport system inner membrane protein
L2_059_256G1_scaffold_383_16
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15589..16635
DNA (1047bp) protein (349aa)
Regulatory protein LacI n=1 Tax=Clostridium sp. CAG:265 RepID=R6L1T7_9CLOT
Regulatory protein LacI {ECO:0000313|EMBL:CDB76086.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
LacI family transcriptional regulator
L2_059_256G1_scaffold_383_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16862..17311)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28210.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L2_059_256G1_scaffold_383_18
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17394..17639)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28210.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
37-kD nucleoid-associated bacterial family protein
L2_059_256G1_scaffold_383_19
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17996..18892)
DNA (897bp) protein (299aa)
LysR substrate binding domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJT6_9CLOT
LysR substrate binding domain protein {ECO:0000313|EMBL:EKY28211.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
HTH-type transcriptional regulator gltC
L2_059_256G1_scaffold_383_20
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19123..20352
DNA (1230bp) protein (410aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKW4_9CLOT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EKY28212.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ydiM1; inner membrane transport protein YdiM
L2_059_256G1_scaffold_383_21
unknown

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20489..20719
DNA (231bp) protein (77aa)

This feature has no annotations

L2_059_256G1_scaffold_383_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20870..22186)
DNA (1317bp) protein (439aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEU9_9CLOT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EKY26461.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
major facilitator superfamily transporter
L2_059_256G1_scaffold_383_23
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22128..22928)
DNA (801bp) protein (267aa)
fhuC; Iron(3+)-hydroxamate import ATP-binding protein FhuC (EC:3.6.3.34)
Putative ferrichrome ABC transporter, ATP-binding protein FhuC n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFK1_9CLOT
Putative ferrichrome ABC transporter, ATP-binding protein FhuC {ECO:0000313|EMBL:EKY26460.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L2_059_256G1_scaffold_383_24
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22931..23938)
DNA (1008bp) protein (336aa)
Putative ferrichrome transport system permease protein FhuG n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEN7_9CLOT
Putative ferrichrome transport system permease protein FhuG {ECO:0000313|EMBL:EKY26459.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
transport system permease
L2_059_256G1_scaffold_383_25
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23938..24930)
DNA (993bp) protein (331aa)
Putative iron(3+)-hydroxamate import system permease protein FhuB n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEQ4_9CLOT
Putative iron(3+)-hydroxamate import system permease protein FhuB {ECO:0000313|EMBL:EKY26458.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative membrane protein
L2_059_256G1_scaffold_383_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24917..25867)
DNA (951bp) protein (317aa)
Periplasmic binding protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFT4_9CLOT
Periplasmic binding protein {ECO:0000313|EMBL:EKY26457.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative secreted protein
L2_059_256G1_scaffold_383_27
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26144..27148
DNA (1005bp) protein (335aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEU3_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EKY26456.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L2_059_256G1_scaffold_383_28
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27418..28170)
DNA (753bp) protein (251aa)
AP endonuclease, family 2 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QET8_9CLOT
AP endonuclease, family 2 {ECO:0000313|EMBL:EKY26451.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
xylose isomerase domain-containing protein TIM barrel
L2_059_256G1_scaffold_383_29
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28335..30338)
DNA (2004bp) protein (668aa)
NADH oxidase (EC:1.-.-.-)
Putative NADH oxidase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEP0_9CLOT
Putative NADH oxidase {ECO:0000313|EMBL:EKY26443.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L2_059_256G1_scaffold_383_30
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30962..31408)
DNA (447bp) protein (149aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
3-dehydroquinate dehydratase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFS1_9CLOT
3-dehydroquinate dehydratase
Displaying items 1-30 of 35 in total

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