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L2_059_256G1_scaffold_394

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_394_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(260..499)
DNA (240bp) protein (80aa)
30S ribosomal protein S18 n=3 Tax=Clostridiales RepID=G9YQW0_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
rpsR; 30S ribosomal protein S18
L2_059_256G1_scaffold_394_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(613..1092)
DNA (480bp) protein (160aa)
Single-stranded DNA-binding protein n=3 Tax=Clostridiales RepID=G9YQV9_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ssb; single-stranded DNA-binding protein
L2_059_256G1_scaffold_394_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1105..1401)
DNA (297bp) protein (99aa)
30S ribosomal protein S6 n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NVZ7_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
rpsF; 30S ribosomal protein S6
L2_059_256G1_scaffold_394_4
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

1626..2981
DNA (1356bp) protein (452aa)
MATE efflux family protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6XXD3_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDD28403.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
MATE efflux family protein
L2_059_256G1_scaffold_394_5
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3044..3913)
DNA (870bp) protein (290aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
UDP-glucose pyrophosphorylase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NW02_9FIRM
L2_059_256G1_scaffold_394_6
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4035..4586)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6THT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC72978.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L2_059_256G1_scaffold_394_7
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4735..5484)
DNA (750bp) protein (250aa)
Exonuclease n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KM96_9FIRM
Exonuclease {ECO:0000313|EMBL:EEX69260.1}; TaxID=500635 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella multacida DSM 20544.;"
putative exonuclease
L2_059_256G1_scaffold_394_8
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

5783..6547
DNA (765bp) protein (255aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IL18_THETR
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase {ECO:0000313|EMBL:AGB19449.1}; TaxID=698948 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum M0795.;"
L2_059_256G1_scaffold_394_9
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6756..7676
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NS84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01122.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_059_256G1_scaffold_394_10
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7823..8902
DNA (1080bp) protein (360aa)
pscK; pseudouridine kinase (EC:2.7.1.-)
HTH domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPV7_9FIRM
HTH domain protein {ECO:0000313|EMBL:EDN01882.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_059_256G1_scaffold_394_11
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8973..9896
DNA (924bp) protein (308aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Pseudouridine-5'-phosphate glycosidase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPV6_9FIRM
hypothetical protein
L2_059_256G1_scaffold_394_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10012..10374
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD160 RepID=T3D994_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQF23437.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
putative dimeric alpha-beta barrel protein
L2_059_256G1_scaffold_394_13
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10516..12789
DNA (2274bp) protein (758aa)
5'-nucleotidase, C-terminal domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NV68_9FIRM
5'-nucleotidase, C-terminal domain protein {ECO:0000313|EMBL:EDN00269.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
putative 2',3'-cyclic-nucleotide 2'-phosphodiesterase
L2_059_256G1_scaffold_394_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12998..13570
DNA (573bp) protein (191aa)
UBA/TS-N domain protein n=2 Tax=Clostridiales RepID=G9YPR2_9FIRM
UBA/TS-N domain protein {ECO:0000313|EMBL:EHM52430.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
translation elongation factor Ts
L2_059_256G1_scaffold_394_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13614..14303
DNA (690bp) protein (230aa)
Response regulator ArlR n=2 Tax=Clostridiales RepID=G9YPR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56812.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L2_059_256G1_scaffold_394_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14300..14797
DNA (498bp) protein (166aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YPR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56811.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_059_256G1_scaffold_394_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14819..16303
DNA (1485bp) protein (495aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Clostridiales RepID=G9YPR5_9FIRM
signal transduction histidine kinase
L2_059_256G1_scaffold_394_18
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16363..16686)
DNA (324bp) protein (108aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NW11_9FIRM
integral membrane sensor signal transduction histidine kinase
L2_059_256G1_scaffold_394_19
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16705..17406)
DNA (702bp) protein (234aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NW11_9FIRM
integral membrane sensor signal transduction histidine kinase
L2_059_256G1_scaffold_394_20
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17406..18077)
DNA (672bp) protein (224aa)
Response regulator receiver domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NW12_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDM99669.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_059_256G1_scaffold_394_21
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18080..19243)
DNA (1164bp) protein (388aa)
Cysteine desulfurase family protein (Fragment) n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BL50_9CLOT
Cysteine desulfurase family protein {ECO:0000313|EMBL:ERI72960.1}; Flags: Fragment;; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
cysteine desulfurase
L2_059_256G1_scaffold_394_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19268..20443)
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33098.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_059_256G1_scaffold_394_23
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20670..21845
DNA (1176bp) protein (392aa)
NADP-dependent malic enzyme (EC:1.1.1.40)
Putative NAD-dependent malic enzyme n=2 Tax=Oscillibacter RepID=U2Q3G7_9FIRM
Putative NAD-dependent malic enzyme {ECO:0000313|EMBL:ERK63798.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_059_256G1_scaffold_394_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22035..22745
DNA (711bp) protein (237aa)
Uncharacterized protein (Fragment) n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM42685.1}; Flags: Fragment;; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_059_256G1_scaffold_394_25
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22828..24231
DNA (1404bp) protein (468aa)
MBOAT family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NS58_9FIRM
MBOAT family protein {ECO:0000313|EMBL:EDN01096.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
membrane bound O-acyl transferase MBOAT family protein
L2_059_256G1_scaffold_394_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24247..25383
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BNN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56807.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_059_256G1_scaffold_394_27
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(25434..26459)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2Y8P6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12768.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L2_059_256G1_scaffold_394_28
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(26473..27954)
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XSX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12769.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
D-alanine export protein
L2_059_256G1_scaffold_394_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28140..28805
DNA (666bp) protein (222aa)
YheO-like protein n=2 Tax=Clostridiales RepID=G9YU73_9FIRM
YheO-like protein {ECO:0000313|EMBL:ERI73852.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
YheO domain-containing protein
L2_059_256G1_scaffold_394_30
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28831..30243
DNA (1413bp) protein (471aa)
Dipeptidase PepV n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPC8_9FIRM
Dipeptidase PepV {ECO:0000313|EMBL:EDN02010.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
dipeptidase
Displaying items 1-30 of 34 in total

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