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L2_059_256G1_scaffold_435

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_435_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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438..566
DNA (129bp) protein (43aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZLH8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16447.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_059_256G1_scaffold_435_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

646..1854
DNA (1209bp) protein (403aa)
hexokinase (EC:2.7.1.1)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PJ50_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16446.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L2_059_256G1_scaffold_435_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1951..2730)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U8Z8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16445.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
alpha-glucosidase
L2_059_256G1_scaffold_435_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2681..3940)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZLH6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16445.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Glycoside hydrolase 97.
L2_059_256G1_scaffold_435_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4138..5652
DNA (1515bp) protein (505aa)
Divalent anion:Na+ symporter (DASS) family transporter n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9E9C3_9BACE
Divalent anion:Na+ symporter (DASS) family transporter {ECO:0000313|EMBL:EIY16444.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Na+/dicarboxylate or sulfate symporter
L2_059_256G1_scaffold_435_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5735..9097)
DNA (3363bp) protein (1121aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PJL9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16443.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Signal transduction histidine kinase
L2_059_256G1_scaffold_435_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9154..9750)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UTX5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16442.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
two-component system sensor histidine kinase/response regulator
L2_059_256G1_scaffold_435_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9985..10587
DNA (603bp) protein (201aa)
RNA polymerase sigma-70 factor, expansion family 1 n=2 Tax=Bacteroides RepID=I9PJ45_9BACE
RNA polymerase sigma-70 factor expansion family 1 {ECO:0000313|EMBL:CCZ74640.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA polymerase ECF-type sigma factor
L2_059_256G1_scaffold_435_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10622..11647
DNA (1026bp) protein (342aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Bacteroides caccae RepID=A5ZLH2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16440.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
anti-sigma factor
L2_059_256G1_scaffold_435_10
unknown

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comp(11712..11849)
DNA (138bp) protein (46aa)

This feature has no annotations

L2_059_256G1_scaffold_435_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11907..15203
DNA (3297bp) protein (1099aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9E9B8_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY16439.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
frrG; putative outer membrane protein
L2_059_256G1_scaffold_435_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15226..16800
DNA (1575bp) protein (525aa)
SusD family protein n=2 Tax=Bacteroides caccae RepID=A5ZLH0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16438.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
frrH; putative outer membrane protein
L2_059_256G1_scaffold_435_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16781..18112
DNA (1332bp) protein (444aa)
Fibrobacter succinogene major paralogous domain protein n=2 Tax=Bacteroides caccae RepID=A5ZLG9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16437.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L2_059_256G1_scaffold_435_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18133..19629
DNA (1497bp) protein (499aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZLG8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16436.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_059_256G1_scaffold_435_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19645..21099
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UQE8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16435.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_059_256G1_scaffold_435_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21245..23419)
DNA (2175bp) protein (725aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9E9B6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16434.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
alpha-1,2-mannosidase, putative
L2_059_256G1_scaffold_435_17
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23462..23590
DNA (129bp) protein (43aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZLG5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74632.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L2_059_256G1_scaffold_435_18
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23656..25434
DNA (1779bp) protein (593aa)
signal peptide peptidase A. Serine peptidase. MEROPS family S49 (EC:3.4.21.-)
Signal peptide peptidase SppA, 67K type n=3 Tax=Bacteroides RepID=A5ZLG4_9BACE
Signal peptide peptidase SppA 67K type {ECO:0000313|EMBL:CCZ74631.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L2_059_256G1_scaffold_435_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25445..26563
DNA (1119bp) protein (373aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
lipid-A-disaccharide kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase n=2 Tax=Bacteroides caccae RepID=A5ZLG3_9BACE
L2_059_256G1_scaffold_435_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26502..27311
DNA (810bp) protein (270aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
purine nucleoside phosphorylase I, inosine and guanosine-specific (EC:2.4.2.1)
Purine nucleoside phosphorylase n=2 Tax=Bacteroides caccae RepID=I8UQE4_9BACE
L2_059_256G1_scaffold_435_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27328..28362
DNA (1035bp) protein (345aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Thiamine-monophosphate kinase n=3 Tax=Bacteroides RepID=A5ZLG1_9BACE
thiamine-monophosphate kinase
L2_059_256G1_scaffold_435_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28828..30069
DNA (1242bp) protein (414aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K5Z7W9_9PORP
Phage integrase family protein {ECO:0000313|EMBL:EXY39785.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
integrase
L2_059_256G1_scaffold_435_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30125..30325
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZK61_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EXY39786.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
L2_059_256G1_scaffold_435_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30301..31221
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZJM2_9PORP
Clp protease family protein {ECO:0000313|EMBL:EXY39787.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
hypothetical protein
L2_059_256G1_scaffold_435_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31352..31633)
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5YDU7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11682.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_059_256G1_scaffold_435_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31638..31925)
DNA (288bp) protein (96aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6A7N7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11683.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_059_256G1_scaffold_435_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32262..32570
DNA (309bp) protein (103aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z7X4_9PORP
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EKN11684.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
excisionase
L2_059_256G1_scaffold_435_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32551..33528
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZK66_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN21774.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
virulence-associated E family protein
Displaying 28 items

View Taxonomy