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L2_059_256G1_scaffold_441

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_441_1
unknown

Not on your lists

3..149
DNA (147bp) protein (49aa)

This feature has no annotations

L2_059_256G1_scaffold_441_2
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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155..1474
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NRR4_9FIRM
L2_059_256G1_scaffold_441_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1497..1916
DNA (420bp) protein (140aa)
FOG: CBS domain n=2 Tax=Clostridiales RepID=D4M5X1_9FIRM
FOG: CBS domain
FOG: CBS domain {ECO:0000313|EMBL:CBL26633.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_256G1_scaffold_441_4
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2025..2333
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=2 Tax=Clostridiales RepID=D4M5X2_9FIRM
LSU ribosomal protein L21P
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_256G1_scaffold_441_5
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2344..2676
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P8K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC14881.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Predicted ribosomal protein
L2_059_256G1_scaffold_441_6
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2682..2966
DNA (285bp) protein (95aa)
50S ribosomal protein L27 n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5X4_9FIRM
LSU ribosomal protein L27P
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_256G1_scaffold_441_7
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3164..4447
DNA (1284bp) protein (428aa)
GTPase Obg n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P2E4_9FIRM
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454, ECO:0000256|SAAS:SAAS00043060}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Obg family GTPase CgtA
L2_059_256G1_scaffold_441_8
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4458..4751
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R6NRT0_9FIRM
conserved hypothetical protein TIGR00253
Uncharacterized protein {ECO:0000313|EMBL:CBL26638.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_256G1_scaffold_441_9
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4779..5459
DNA (681bp) protein (227aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P2F1_9FIRM
L2_059_256G1_scaffold_441_10
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5534..6109
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5X7_9FIRM
conserved hypothetical protein TIGR00488
Uncharacterized protein {ECO:0000313|EMBL:CBL26639.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_256G1_scaffold_441_11
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6113..6469
DNA (357bp) protein (119aa)
Ribosomal silencing factor RsfS n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5X8_9FIRM
iojap-related protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_256G1_scaffold_441_12
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6576..7190)
DNA (615bp) protein (205aa)
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
LexA repressor n=2 Tax=Clostridiales RepID=D4M5Y1_9FIRM
L2_059_256G1_scaffold_441_13
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7409..7768
DNA (360bp) protein (120aa)
LysM domain n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NUJ0_9FIRM
LysM domain {ECO:0000313|EMBL:CDC14900.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
LysM domain.
L2_059_256G1_scaffold_441_14
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8017..9087
DNA (1071bp) protein (357aa)
Site-specific recombinase XerD n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5Y3_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBL26645.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_256G1_scaffold_441_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9182..9832)
DNA (651bp) protein (217aa)
Cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000313|EMBL:CBL26646.1}; EC=2.7.4.14 {ECO:0000313|EMBL:CBL26646.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Cytidylate kinase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5Y4_9FIRM
L2_059_256G1_scaffold_441_16
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9941..10855)
DNA (915bp) protein (305aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028, ECO:0000313|EMBL:CBL26647.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Ribosomal large subunit pseudouridine synthase D n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5Y5_9FIRM
L2_059_256G1_scaffold_441_17
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10888..11406)
DNA (519bp) protein (173aa)
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Lipoprotein signal peptidase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5Y6_9FIRM
L2_059_256G1_scaffold_441_18
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11442..12242)
DNA (801bp) protein (267aa)
Uncharacterized conserved protein contains S4-like domain n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P2H2_9FIRM
Uncharacterized conserved protein contains S4-like domain {ECO:0000313|EMBL:CDC14909.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Uncharacterized conserved protein, contains S4-like domain
L2_059_256G1_scaffold_441_19
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12283..12825)
DNA (543bp) protein (181aa)
Cell division protein SepF n=2 Tax=Clostridiales RepID=D4M5Y8_9FIRM
hypothetical protein
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_256G1_scaffold_441_20
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12963..13655)
DNA (693bp) protein (231aa)
Pyridoxal phosphate enzyme, YggS family n=2 Tax=Clostridiales RepID=D4M5Y9_9FIRM
pyridoxal phosphate enzyme, YggS family
Pyridoxal phosphate enzyme YggS family {ECO:0000313|EMBL:CDC14911.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_256G1_scaffold_441_21
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13734..15128)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PYX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC14912.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_256G1_scaffold_441_22
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15374..16405)
DNA (1032bp) protein (344aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P2H9_9FIRM
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CDC14914.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
D-alanyl-D-alanine carboxypeptidase
L2_059_256G1_scaffold_441_23
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16407..16802)
DNA (396bp) protein (132aa)
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase {ECO:0000256|SAAS:SAAS00089917}; EC=4.2.3.3 {ECO:0000256|SAAS:SAAS00089921};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Methylglyoxal synthase n=2 Tax=Clostridiales RepID=D4M5Z1_9FIRM
L2_059_256G1_scaffold_441_24
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16818..17948)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P8P5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC14916.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Bacterial cell division membrane protein
L2_059_256G1_scaffold_441_25
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17945..18154)
DNA (210bp) protein (70aa)
Septum formation topological specificity factor MinE n=2 Tax=Clostridiales RepID=D4M5Z2_9FIRM
Septum formation topological specificity factor MinE.
Septum formation topological specificity factor MinE {ECO:0000313|EMBL:CDC14917.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_256G1_scaffold_441_26
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18166..18957)
DNA (792bp) protein (264aa)
Site-determining protein n=2 Tax=Clostridiales RepID=D4M5Z3_9FIRM
septum site-determining protein MinD
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_256G1_scaffold_441_27
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19003..19647)
DNA (645bp) protein (215aa)
Probable septum site-determining protein MinC n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5Z4_9FIRM
Septum formation inhibitor
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_256G1_scaffold_441_28
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19674..22553)
DNA (2880bp) protein (960aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NUL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC14920.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
pbpA1; penicillin-binding protein PbpA1
L2_059_256G1_scaffold_441_29
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22546..23079)
DNA (534bp) protein (178aa)
Rod shape-determining protein MreD n=2 Tax=Clostridiales RepID=D4M5Z5_9FIRM
rod shape-determining protein MreD
Rod shape-determining protein MreD {ECO:0000313|EMBL:CDC14921.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_256G1_scaffold_441_30
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23092..23964)
DNA (873bp) protein (291aa)
Cell shape-determining protein MreC n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5Z6_9FIRM
rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Displaying items 1-30 of 37 in total

View Taxonomy