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L2_059_256G1_scaffold_448

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_448_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(146..1528)
DNA (1383bp) protein (461aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Dihydrolipoyl dehydrogenase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEE0_9FIRM
dihydrolipoamide dehydrogenase
L2_059_256G1_scaffold_448_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1689..3137)
DNA (1449bp) protein (483aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEE1_9FIRM
glycine dehydrogenase subunit beta
L2_059_256G1_scaffold_448_3
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3134..4450)
DNA (1317bp) protein (439aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
gcvPA; glycine cleavage system P protein subunit 1 (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B6S2_9CLOT
L2_059_256G1_scaffold_448_4
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(4454..4834)
DNA (381bp) protein (127aa)
Glycine cleavage system H protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SJ00_9FIRM
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
gcvH; glycine cleavage system H protein
L2_059_256G1_scaffold_448_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4906..5985)
DNA (1080bp) protein (360aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D2T3_9CLOT
L2_059_256G1_scaffold_448_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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6462..8381
DNA (1920bp) protein (640aa)
FHA domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPG8_9FIRM
FHA domain protein {ECO:0000313|EMBL:EHM52700.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_059_256G1_scaffold_448_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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8368..9738
DNA (1371bp) protein (457aa)
Peptidoglycan glycosyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9U4_9FIRM
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:EGJ47122.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative penicillin-binding protein A
L2_059_256G1_scaffold_448_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9988..11775)
DNA (1788bp) protein (596aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YR45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53287.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_059_256G1_scaffold_448_9
Alcanivorax hongdengensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11895..12758)
DNA (864bp) protein (288aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=1177179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax hongdengensis A-11-3.;"
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00037A155E
metallo-beta-lactamase superfamily protein
L2_059_256G1_scaffold_448_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12743..13324)
DNA (582bp) protein (194aa)
HDIG domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DGX9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF53289.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_059_256G1_scaffold_448_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13442..14212)
DNA (771bp) protein (257aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YX77_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EHM37915.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
XRE family transcriptional regulator
L2_059_256G1_scaffold_448_12
unknown

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14695..14916
DNA (222bp) protein (74aa)

This feature has no annotations

L2_059_256G1_scaffold_448_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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15209..17050
DNA (1842bp) protein (614aa)
Radical SAM domain protein n=3 Tax=Clostridiales RepID=G9YX72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55806.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
radical SAM protein
L2_059_256G1_scaffold_448_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17078..17749
DNA (672bp) protein (224aa)
Radical SAM-linked protein n=3 Tax=Clostridiales RepID=G9YX71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55805.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_059_256G1_scaffold_448_15
Oxalobacter formigenes, Oxalobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17988..20018
DNA (2031bp) protein (677aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X4Y5_OXAFO
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EEO28271.1}; TaxID=556268 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Oxalobacter.;" source="Oxalobacter formigenes HOxBLS.;"
response regulator receiver:Metal-dependent phosphohydrolase
L2_059_256G1_scaffold_448_16
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20100..20687)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NV92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00293.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
conserved membrane protein of unknown function
L2_059_256G1_scaffold_448_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20927..21319)
DNA (393bp) protein (131aa)
Thioesterase family protein n=2 Tax=Clostridiales RepID=G9YX66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35451.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Thioesterase superfamily
L2_059_256G1_scaffold_448_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21451..22536)
DNA (1086bp) protein (362aa)
ABC transporter, solute-binding protein n=2 Tax=Oscillibacter RepID=U2QVD2_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERK66875.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
potD; spermidine/putrescine ABC transporter spermidine/putrescine-binding protein
L2_059_256G1_scaffold_448_19
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22603..23466)
DNA (864bp) protein (288aa)
ABC transporter, permease protein n=2 Tax=Oscillibacter RepID=U2REB7_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:ERK66874.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
potC; spermidine/putrescine ABC transporter permease protein
L2_059_256G1_scaffold_448_20
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23463..24383)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M6B1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63402.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
potB; spermidine/putrescine ABC transporter permease protein
L2_059_256G1_scaffold_448_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24373..25560)
DNA (1188bp) protein (396aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
potA; spermidine/putrescine ABC transporter ATP-binding protein (EC:3.6.3.31)
Spermidine/putrescine transport system ATP-binding protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA30_9FIRM
L2_059_256G1_scaffold_448_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25735..26697)
DNA (963bp) protein (321aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
RluA family pseudouridine synthase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6V4_9FIRM
putative pseudouridine synthase
L2_059_256G1_scaffold_448_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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26971..27477
DNA (507bp) protein (169aa)
Putative ACR n=3 Tax=Clostridiales RepID=G9YRM0_9FIRM
Putative ACR {ECO:0000313|EMBL:EHM48964.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_059_256G1_scaffold_448_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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27522..27719
DNA (198bp) protein (66aa)
50S ribosomal protein L32 n=3 Tax=Clostridiales RepID=G9YRL9_9FIRM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
rpmF; 50S ribosomal protein L32
L2_059_256G1_scaffold_448_25
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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27896..29386
DNA (1491bp) protein (497aa)
Putative FeS-containing Cyanobacterial-specific oxidoreductase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NV81_9FIRM
Putative FeS-containing Cyanobacterial-specific oxidoreductase {ECO:0000313|EMBL:EDN00282.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_059_256G1_scaffold_448_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29383..30708
DNA (1326bp) protein (442aa)
GTPase (EC:3.6.1.-)
GTPase Der n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6V8_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_059_256G1_scaffold_448_27
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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30712..31422
DNA (711bp) protein (237aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YJV6_9FIRM
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L2_059_256G1_scaffold_448_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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31419..32420
DNA (1002bp) protein (334aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRL4_9FIRM
L2_059_256G1_scaffold_448_29
unknown

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32450..32659
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying 29 items

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