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L2_059_256G1_scaffold_486

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Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_486_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(344..1354)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75799.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_059_256G1_scaffold_486_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1373..2065)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75800.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_059_256G1_scaffold_486_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2318..3058
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75801.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
TraX protein.
L2_059_256G1_scaffold_486_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3166..3837)
DNA (672bp) protein (224aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76272.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_059_256G1_scaffold_486_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3900..6080)
DNA (2181bp) protein (727aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Topoisomerase IA (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGC3_9FIRM
L2_059_256G1_scaffold_486_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6082..6837)
DNA (756bp) protein (252aa)
Formate/nitrite transporter n=2 Tax=Ruminococcus RepID=C6JGC4_9FIRM
Formate/nitrite transporter {ECO:0000313|EMBL:EES75804.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Formate/nitrite family of transporters
L2_059_256G1_scaffold_486_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7053..8066)
DNA (1014bp) protein (338aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
selenophosphate synthase (EC:2.7.9.3)
Selenide, water dikinase n=2 Tax=Ruminococcus RepID=C6JGC5_9FIRM
L2_059_256G1_scaffold_486_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8313..8579)
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76264.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Protein of unknown function (DUF3343).
L2_059_256G1_scaffold_486_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8614..9699)
DNA (1086bp) protein (362aa)
aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=2 Tax=Ruminococcus RepID=C6JGC7_9FIRM
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EES75807.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_059_256G1_scaffold_486_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9837..11216)
DNA (1380bp) protein (460aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=2 Tax=Ruminococcus RepID=C6JGC8_9FIRM
L2_059_256G1_scaffold_486_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11582..12208)
DNA (627bp) protein (209aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76260.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_059_256G1_scaffold_486_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12281..13195)
DNA (915bp) protein (305aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase n=2 Tax=Ruminococcus RepID=C6JGD0_9FIRM
L2_059_256G1_scaffold_486_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13279..13899)
DNA (621bp) protein (207aa)
Phosphatidylserine synthase (EC:2.7.8.8)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76256.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_059_256G1_scaffold_486_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13911..14942)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76254.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_059_256G1_scaffold_486_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15248..15874
DNA (627bp) protein (209aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76252.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L2_059_256G1_scaffold_486_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15864..16658
DNA (795bp) protein (265aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CEB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76250.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
L2_059_256G1_scaffold_486_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16904..18277)
DNA (1374bp) protein (458aa)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase (EC:2.5.1.49)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75815.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_059_256G1_scaffold_486_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18599..20299
DNA (1701bp) protein (567aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76243.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_059_256G1_scaffold_486_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20323..21762)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76242.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
putative efflux protein, MATE family
L2_059_256G1_scaffold_486_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21811..22551)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75818.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_059_256G1_scaffold_486_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22783..23805)
DNA (1023bp) protein (341aa)
Transmembrane protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CG29_9FIRM
Transmembrane protein {ECO:0000313|EMBL:CDD76238.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted acyltransferases
L2_059_256G1_scaffold_486_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23953..24708)
DNA (756bp) protein (252aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76236.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_059_256G1_scaffold_486_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25127..26308
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76330.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L2_059_256G1_scaffold_486_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26528..27424
DNA (897bp) protein (299aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CDR4_9FIRM
L2_059_256G1_scaffold_486_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27601..28629
DNA (1029bp) protein (343aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CG94_9FIRM
L2_059_256G1_scaffold_486_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28633..29574
DNA (942bp) protein (314aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGE5_9FIRM
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EES75825.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_059_256G1_scaffold_486_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29635..31602)
DNA (1968bp) protein (656aa)
TRAP transporter, 4TM/12TM fusion protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGE6_9FIRM
TRAP transporter, 4TM/12TM fusion protein {ECO:0000313|EMBL:EES75826.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative transporter
L2_059_256G1_scaffold_486_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31608..32609)
DNA (1002bp) protein (334aa)
TAXI family TRAP transporter solute receptor n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGE7_9FIRM
TAXI family TRAP transporter solute receptor {ECO:0000313|EMBL:EES75827.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative transporter
L2_059_256G1_scaffold_486_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32761..33387
DNA (627bp) protein (209aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75829.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Cytidylate kinase
L2_059_256G1_scaffold_486_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33494..34264)
DNA (771bp) protein (257aa)
UPF0271 protein BN806_01143 n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CE33_9FIRM
UPF0271 protein BN806_01143 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Uncharacterized proteins, homologs of lactam utilization protein B
Displaying items 1-30 of 67 in total

View Taxonomy