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L2_059_256G1_scaffold_543

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_543_1
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..627
DNA (627bp) protein (209aa)
Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit n=3 Tax=Clostridiales RepID=D4MZ91_9FIRM
Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EFV18075.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L2_059_256G1_scaffold_543_2
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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637..1500
DNA (864bp) protein (288aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NX63_9CLOT
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EDS23068.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Aldo/keto reductases, related to diketogulonate reductase
L2_059_256G1_scaffold_543_3
unknown

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2161..2403
DNA (243bp) protein (81aa)
Excisionase from transposon Tn916 n=3 Tax=Clostridiales RepID=D4MZ92_9FIRM
Excisionase from transposon Tn916.
Excisionase from transposon Tn916 {ECO:0000313|EMBL:CBL37937.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_059_256G1_scaffold_543_4
unknown

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2470..2688
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NX65_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL37938.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_059_256G1_scaffold_543_5
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3098..3529)
DNA (432bp) protein (144aa)
Transposase and inactivated derivatives n=3 Tax=Clostridiales RepID=D4MZ94_9FIRM
Transposase and inactivated derivatives
Transposase {ECO:0000313|EMBL:EFV18072.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L2_059_256G1_scaffold_543_6
unknown

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comp(3869..5029)
DNA (1161bp) protein (387aa)
isoaspartyl dipeptidase IadA (EC:3.4.19.5)
Isoaspartyl dipeptidase {ECO:0000256|PIRNR:PIRNR001238}; EC=3.4.19.- {ECO:0000256|PIRNR:PIRNR001238};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Isoaspartyl dipeptidase n=3 Tax=Clostridiales RepID=D4MZ95_9FIRM
L2_059_256G1_scaffold_543_7
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5111..6556)
DNA (1446bp) protein (482aa)
Transporter, NhaC family (TC 2.A.35) n=3 Tax=Clostridiales RepID=D4MZ96_9FIRM
transporter, NhaC family (TC 2.A.35)
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:EFV18070.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L2_059_256G1_scaffold_543_8
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6678..7346)
DNA (669bp) protein (223aa)
Uridine kinase {ECO:0000256|RuleBase:RU003825, ECO:0000256|SAAS:SAAS00007563}; EC=2.7.1.48 {ECO:0000256|RuleBase:RU003825, ECO:0000256|SAAS:SAAS00007538};; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
uridine kinase (EC:2.7.1.48)
Uridine kinase n=2 Tax=Clostridiales RepID=B0NX69_9CLOT
L2_059_256G1_scaffold_543_9
unknown

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comp(7372..8373)
DNA (1002bp) protein (334aa)
Integrase core domain n=2 Tax=Clostridiales RepID=D4MZ97_9FIRM
Integrase core domain.
Integrase core domain {ECO:0000313|EMBL:CBL37942.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_059_256G1_scaffold_543_10
unknown

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8814..9464
DNA (651bp) protein (217aa)
Type I site-specific restriction-modification system, R (Restriction) subunit and related helicases n=2 Tax=Clostridiales RepID=D4MZ99_9FIRM
Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
Type I site-specific restriction-modification system, R (Restriction) subunit and related helicases {ECO:0000313|EMBL:CBL37944.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_059_256G1_scaffold_543_11
unknown

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9539..10258
DNA (720bp) protein (240aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0NX73_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL37945.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_059_256G1_scaffold_543_12
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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10530..10991
DNA (462bp) protein (154aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Phosphotyrosine protein phosphatase n=2 Tax=Lachnospiraceae RepID=E5VGP0_9FIRM
Phosphotyrosine protein phosphatase {ECO:0000313|EMBL:CDA32946.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L2_059_256G1_scaffold_543_13
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11001..11750)
DNA (750bp) protein (250aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R5Z1R4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA32945.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
hypothetical protein
L2_059_256G1_scaffold_543_14
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11782..13275)
DNA (1494bp) protein (498aa)
Helix-hairpin-helix domain-containing protein n=2 Tax=Lachnospiraceae RepID=E5VGN8_9FIRM
Helix-hairpin-helix domain-containing protein {ECO:0000313|EMBL:EFV18062.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Predicted DNA-binding protein with the Helix-hairpin-helix motif
L2_059_256G1_scaffold_543_15
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13421..13771)
DNA (351bp) protein (117aa)
PTS system, fructose-specific, IIB component (EC:2.7.1.69)
PTS system fructose-specific IIB component n=2 Tax=Lachnospiraceae RepID=R5YZU3_9FIRM
PTS system fructose-specific IIB component {ECO:0000313|EMBL:CDA32943.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L2_059_256G1_scaffold_543_16
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13983..15086
DNA (1104bp) protein (368aa)
Transcriptional regulator, GntR family n=3 Tax=Clostridiales RepID=D4MZA5_9FIRM
transcriptional regulator, GntR family
Putative arabinose metabolism transcriptional repressor {ECO:0000313|EMBL:EKY19572.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L2_059_256G1_scaffold_543_17
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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15109..16605
DNA (1497bp) protein (499aa)
L-arabinose isomerase (EC:5.3.1.4)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L-arabinose isomerase n=3 Tax=Clostridiales RepID=D4MZA6_9FIRM
L2_059_256G1_scaffold_543_18
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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16623..18215
DNA (1593bp) protein (531aa)
Carbohydrate kinase, FGGY family protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PV12_9FIRM
Carbohydrate kinase, FGGY family protein {ECO:0000313|EMBL:EKY19574.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Sugar (pentulose and hexulose) kinases
L2_059_256G1_scaffold_543_19
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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18230..18922
DNA (693bp) protein (231aa)
L-ribulose 5-phosphate 4-epimerase (EC:5.1.3.4)
L-ribulose 5-phosphate 4-epimerase n=2 Tax=Lachnospiraceae RepID=R5Z879_9FIRM
L-ribulose 5-phosphate 4-epimerase {ECO:0000313|EMBL:CDA32939.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L2_059_256G1_scaffold_543_20
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18976..19557
DNA (582bp) protein (194aa)
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Aldose 1-epimerase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PV95_9FIRM
L2_059_256G1_scaffold_543_21
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19600..19992
DNA (393bp) protein (131aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PV95_9FIRM
L2_059_256G1_scaffold_543_22
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20135..21754
DNA (1620bp) protein (540aa)
Response regulator receiver domain protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PW12_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDS23088.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L2_059_256G1_scaffold_543_23
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21754..23220
DNA (1467bp) protein (489aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PV32_9FIRM
L2_059_256G1_scaffold_543_24
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23408..24412
DNA (1005bp) protein (335aa)
Sugar-binding domain protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PV17_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:EKY19579.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L2_059_256G1_scaffold_543_25
unknown

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24591..26108
DNA (1518bp) protein (506aa)
Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) n=2 Tax=Clostridiales RepID=D4MZB4_9FIRM
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-)
Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CBL37959.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_059_256G1_scaffold_543_26
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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26111..27151
DNA (1041bp) protein (347aa)
Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) n=5 Tax=Clostridiales RepID=D4MZB5_9FIRM
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
Branched-chain amino acid transport system/permease component {ECO:0000313|EMBL:CDA32933.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L2_059_256G1_scaffold_543_27
unknown

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27151..28197
DNA (1047bp) protein (349aa)
Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) n=3 Tax=Clostridiales RepID=D4MZB6_9FIRM
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CBL37961.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_059_256G1_scaffold_543_28
unknown

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28238..29722
DNA (1485bp) protein (495aa)
L-fucose isomerase and related proteins n=3 Tax=Clostridiales RepID=D4MZB7_9FIRM
L-fucose isomerase and related proteins
L-fucose isomerase and related proteins {ECO:0000313|EMBL:CBL37962.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Displaying 28 items

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