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L2_059_256G1_scaffold_553

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_553_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..1042
DNA (1041bp) protein (347aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VDI8_BACVU
Phage integrase family protein {ECO:0000313|EMBL:KDS33356.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
recombinase
L2_059_256G1_scaffold_553_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1489..2106
DNA (618bp) protein (206aa)
Uncharacterized protein n=3 Tax=Bacteroides dorei RepID=I9EPM5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS33355.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_059_256G1_scaffold_553_3
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2125..2649
DNA (525bp) protein (175aa)
Uncharacterized protein n=2 Tax=Bacteroides dorei RepID=I8V713_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY31294.1}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
peptidoglycan domain protein
L2_059_256G1_scaffold_553_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2639..3160
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Bacteroides dorei RepID=I8VY26_9BACE
Putative lipoprotein {ECO:0000313|EMBL:KDS33353.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L2_059_256G1_scaffold_553_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3265..3510
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VDI4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS33352.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L2_059_256G1_scaffold_553_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3523..4764)
DNA (1242bp) protein (414aa)
Site-specific recombinase, phage integrase family n=2 Tax=Bacteroides RepID=C6Z9T3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS33351.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
transposase
L2_059_256G1_scaffold_553_7
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4855..5046
DNA (192bp) protein (64aa)
Conserved domain protein n=2 Tax=Bacteroides RepID=D4VDT0_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EGX27729.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L2_059_256G1_scaffold_553_8
unknown

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5063..5188
DNA (126bp) protein (42aa)
hypothetical protein
L2_059_256G1_scaffold_553_9
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5242..5754
DNA (513bp) protein (171aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei 5_1_36/D4.;"
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9IG71_9BACE
Holliday junction resolvase
L2_059_256G1_scaffold_553_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5759..7753
DNA (1995bp) protein (665aa)
Pullulanase, type I n=3 Tax=Bacteroides RepID=I8ZDE8_BACVU
Pullulanase, type I {ECO:0000313|EMBL:EOS05028.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
pullulanase
L2_059_256G1_scaffold_553_11
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7811..8989
DNA (1179bp) protein (393aa)
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Mannonate dehydratase n=3 Tax=Bacteroides RepID=C6Z9S9_9BACE
L2_059_256G1_scaffold_553_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8972..11182)
DNA (2211bp) protein (737aa)
Phospholipase, patatin family n=3 Tax=Bacteroides vulgatus RepID=D4VDH8_BACVU
NTE family protein {ECO:0000313|EMBL:EOS05030.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
patatin-like phospholipase
L2_059_256G1_scaffold_553_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11390..11878
DNA (489bp) protein (163aa)
Exonuclease n=7 Tax=Bacteroides RepID=D4VDH7_BACVU
exonuclease/DNA polymerase III epsilon c
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:EOS05031.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_059_256G1_scaffold_553_14
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11912..12514
DNA (603bp) protein (201aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L4R1_BACV8
hypothetical protein
Putative YigZ family protein {ECO:0000313|EMBL:EET17635.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L2_059_256G1_scaffold_553_15
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12705..13718
DNA (1014bp) protein (338aa)
Phosphate-selective porin O and P n=3 Tax=root RepID=C6Z9S5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV68454.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
porin
L2_059_256G1_scaffold_553_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13885..15177)
DNA (1293bp) protein (431aa)
UvrABC system protein B n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P2Q5_9BACE
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
excinuclease ABC subunit B
L2_059_256G1_scaffold_553_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15174..15719)
DNA (546bp) protein (182aa)
UvrABC system protein B n=5 Tax=Bacteroides RepID=A6L4R3_BACV8
excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_059_256G1_scaffold_553_18
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15885..16721
DNA (837bp) protein (279aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=A6L4R4_BACV8
membrane protein
Outer membrane assembly lipoprotein YfiO {ECO:0000313|EMBL:CDF18584.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L2_059_256G1_scaffold_553_19
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16738..17073
DNA (336bp) protein (112aa)
Uncharacterized protein n=16 Tax=Bacteroides RepID=A6L4R5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEZ19315.1}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
L2_059_256G1_scaffold_553_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17323..17775
DNA (453bp) protein (151aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L4R6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY73534.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_059_256G1_scaffold_553_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17859..18542)
DNA (684bp) protein (228aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L4R7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05038.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_059_256G1_scaffold_553_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18542..19858)
DNA (1317bp) protein (439aa)
LysM-repeat domain-containing protein n=4 Tax=Bacteroides RepID=A6L4R8_BACV8
LysM repeat-containing protein
LysM-repeat domain-containing protein {ECO:0000313|EMBL:ABR40682.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_059_256G1_scaffold_553_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19851..20150)
DNA (300bp) protein (100aa)
LysM-repeat domain-containing protein n=1 Tax=Bacteroides dorei CAG:222 RepID=R6I0I6_9BACE
peptidase M23B
LysM domain protein {ECO:0000313|EMBL:KDS33336.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_059_256G1_scaffold_553_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20305..23133
DNA (2829bp) protein (943aa)
Excinuclease ABC subunit A n=2 Tax=Bacteroides vulgatus RepID=A6L4R9_BACV8
excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_059_256G1_scaffold_553_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23148..23633
DNA (486bp) protein (162aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=6 Tax=Bacteroides RepID=C6Z9R7_9BACE
transcriptional regulator
L2_059_256G1_scaffold_553_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23740..25401
DNA (1662bp) protein (554aa)
Amino acid/peptide transporter n=3 Tax=Bacteroides RepID=C6Z9R6_9BACE
H+ symporter family protein {ECO:0000313|EMBL:KDS33333.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
H+/peptide symporter
L2_059_256G1_scaffold_553_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25464..26084)
DNA (621bp) protein (207aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=R6ILN1_9BACE
surface protein
Uncharacterized protein {ECO:0000313|EMBL:KDS53833.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L2_059_256G1_scaffold_553_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26081..26359)
DNA (279bp) protein (93aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=A6L4S3_BACV8
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05044.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_059_256G1_scaffold_553_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27125..27304
DNA (180bp) protein (60aa)
Putative t/G mismatch-specific endonuclease {ECO:0000313|EMBL:EYA17633.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
L2_059_256G1_scaffold_553_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27288..27803
DNA (516bp) protein (172aa)
DNA mismatch endonuclease Vsr family protein {ECO:0000313|EMBL:KDS33328.1}; EC=3.1.-.- {ECO:0000313|EMBL:KDS33328.1};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Putative very-short-patch-repair endonuclease n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64Q05_BACFR
putative very-short-patch-repair endonuclease
Displaying items 1-30 of 86 in total

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