ggKbase home page

L2_059_256G1_scaffold_557

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_557_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(614..1990)
DNA (1377bp) protein (459aa)
RNA polymerase sigma factor SigA n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF75_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
RNA polymerase sigma factor, sigma-70 family
L2_059_256G1_scaffold_557_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2061..3020)
DNA (960bp) protein (320aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF76_9FIRM
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFQ08196.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
short-chain dehydrogenase/reductase SDR
L2_059_256G1_scaffold_557_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3284..3766)
DNA (483bp) protein (161aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
tRNA-adenosine deaminase (EC:3.5.4.-)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF78_9FIRM
L2_059_256G1_scaffold_557_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3777..4166)
DNA (390bp) protein (130aa)
CAAX amino terminal protease family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF79_9FIRM
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EFQ08199.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
CAAX amino terminal protease family.
L2_059_256G1_scaffold_557_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4377..5234
DNA (858bp) protein (286aa)
EDD domain protein, DegV family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF81_9FIRM
EDD domain protein, DegV family {ECO:0000313|EMBL:EFQ08201.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
EDD domain protein, DegV family
L2_059_256G1_scaffold_557_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5390..6163)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08202.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted permeases
L2_059_256G1_scaffold_557_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6216..7067)
DNA (852bp) protein (284aa)
Beta-lactamase class A (EC:3.5.2.6)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08203.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_059_256G1_scaffold_557_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7090..8079)
DNA (990bp) protein (330aa)
Zn-dependent dipeptidase, microsomal dipeptidase homolog (EC:3.4.13.19)
Renal dipeptidase family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF84_9FIRM
Renal dipeptidase family protein {ECO:0000313|EMBL:EFQ08204.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_059_256G1_scaffold_557_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8095..11397)
DNA (3303bp) protein (1101aa)
SNF2 family N-terminal domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF85_9FIRM
SNF2 family N-terminal domain protein {ECO:0000313|EMBL:EFQ08205.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Superfamily II DNA/RNA helicases, SNF2 family
L2_059_256G1_scaffold_557_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11559..11951)
DNA (393bp) protein (131aa)
Iron dependent repressor DNA binding domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF87_9FIRM
Iron dependent repressor DNA binding domain protein {ECO:0000313|EMBL:EFQ08207.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Mn-dependent transcriptional regulator
L2_059_256G1_scaffold_557_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12138..12692)
DNA (555bp) protein (185aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region (EC:4.2.1.2)
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF88_9FIRM
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:EFQ08208.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_059_256G1_scaffold_557_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12705..13544)
DNA (840bp) protein (280aa)
fumarase alpha subunit (EC:4.2.1.2)
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF89_9FIRM
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:EFQ08209.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_059_256G1_scaffold_557_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13560..14732)
DNA (1173bp) protein (391aa)
Malic enzyme (EC:1.1.1.38)
Malic enzyme, NAD binding domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF90_9FIRM
Malic enzyme, NAD binding domain protein {ECO:0000313|EMBL:EFQ08210.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_059_256G1_scaffold_557_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15087..16244
DNA (1158bp) protein (386aa)
Putative trigger factor n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF92_9FIRM
Putative trigger factor {ECO:0000313|EMBL:EFQ08212.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
trigger factor
L2_059_256G1_scaffold_557_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16518..17165)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08214.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_059_256G1_scaffold_557_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17245..17859)
DNA (615bp) protein (205aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EFQ08215.1}; EC=2.7.8.5 {ECO:0000313|EMBL:EFQ08215.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF95_9FIRM
L2_059_256G1_scaffold_557_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17878..19203)
DNA (1326bp) protein (442aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
SSU ribosomal protein S12P methylthiotransferase (EC:2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF96_9FIRM
L2_059_256G1_scaffold_557_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19242..19751)
DNA (510bp) protein (170aa)
Regulatory protein RecX n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF97_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_059_256G1_scaffold_557_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19752..20936)
DNA (1185bp) protein (395aa)
Protein RecA n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF98_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
RecA protein
L2_059_256G1_scaffold_557_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21054..22028)
DNA (975bp) protein (325aa)
Protein-(Glutamine-N5) methyltransferase, release factor-specific {ECO:0000313|EMBL:EFQ08219.1}; EC=2.1.1.- {ECO:0000313|EMBL:EFQ08219.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF99_9FIRM
HemK family putative methylases
L2_059_256G1_scaffold_557_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22022..22969)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08220.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted metal-dependent enzyme
L2_059_256G1_scaffold_557_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23032..24456)
DNA (1425bp) protein (475aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFA1_9FIRM
Signal transduction histidine kinase
L2_059_256G1_scaffold_557_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24453..25160)
DNA (708bp) protein (236aa)
Sensory transduction protein RegX3 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFA2_9FIRM
Sensory transduction protein RegX3 {ECO:0000313|EMBL:EFQ08222.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_059_256G1_scaffold_557_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25179..26486)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08223.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_059_256G1_scaffold_557_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26645..28834)
DNA (2190bp) protein (730aa)
Internalin-J n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFA5_9FIRM
Internalin-J {ECO:0000313|EMBL:EFQ08062.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
putative internalin-J
L2_059_256G1_scaffold_557_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(29106..29201)
DNA (96bp) protein (32aa)
50S ribosomal protein L17 n=3 Tax=Faecalibacterium prausnitzii RepID=D4K9I2_9FIRM
LSU ribosomal protein L17P
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Displaying 26 items

View Taxonomy