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L2_059_256G1_scaffold_562

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_562_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..268
DNA (267bp) protein (89aa)
Addiction module toxin, rele/stbe family n=14 Tax=root RepID=C9YMF3_CLODR
addiction module toxin, RelE/StbE family
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:CBL25852.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_256G1_scaffold_562_2
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1178..1801
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZQI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45599.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_059_256G1_scaffold_562_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1940..3532
DNA (1593bp) protein (531aa)
Glycosyl hydrolase family 25 n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZB59_9CLOT
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:CDD45598.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
FOG: Glucan-binding domain (YG repeat)
L2_059_256G1_scaffold_562_4
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3645..4991)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AUH7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45597.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hemolysin
L2_059_256G1_scaffold_562_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5435..7417
DNA (1983bp) protein (661aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
vacuolar-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZWZ3_9CLOT
L2_059_256G1_scaffold_562_6
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7589..8545)
DNA (957bp) protein (319aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z0F9_9CLOT
L2_059_256G1_scaffold_562_7
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8872..10569
DNA (1698bp) protein (566aa)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutaminyl-tRNA synthetase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z813_9CLOT
L2_059_256G1_scaffold_562_8
unknown

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10619..10741
DNA (123bp) protein (41aa)

This feature has no annotations

L2_059_256G1_scaffold_562_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10976..11266
DNA (291bp) protein (97aa)
Oxaloacetate decarboxylase gamma chain n=1 Tax=Clostridium sp. CAG:299 RepID=R6YUK7_9CLOT
Oxaloacetate decarboxylase gamma chain {ECO:0000313|EMBL:CDD39683.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Oxaloacetate decarboxylase, gamma chain.
L2_059_256G1_scaffold_562_10
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11302..11694
DNA (393bp) protein (131aa)
Biotin carboxyl carrier protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AAE3_9CLOT
Biotin carboxyl carrier protein {ECO:0000313|EMBL:CDD39682.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Biotin carboxyl carrier protein
L2_059_256G1_scaffold_562_11
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11733..12176
DNA (444bp) protein (148aa)
Biotin carboxyl carrier protein (EC:4.1.1.41 4.1.1.70)
Biotin carboxyl carrier protein {ECO:0000313|EMBL:CBK77197.1}; EC=4.1.1.41 {ECO:0000313|EMBL:CBK77197.1};; EC=4.1.1.70 {ECO:0000313|EMBL:CBK77197.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Biotin carboxyl carrier protein n=2 Tax=Clostridium RepID=D6DHM3_CLOSC
L2_059_256G1_scaffold_562_12
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12187..13326
DNA (1140bp) protein (380aa)
glutaconyl-CoA decarboxylase beta subunit (EC:4.1.1.70 4.1.1.3)
Glutaconyl-CoA decarboxylase beta subunit {ECO:0000313|EMBL:CBK77198.1}; EC=4.1.1.3 {ECO:0000313|EMBL:CBK77198.1};; EC=4.1.1.70 {ECO:0000313|EMBL:CBK77198.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Glutaconyl-CoA decarboxylase beta subunit n=3 Tax=Clostridium RepID=D6DHM4_CLOSC
L2_059_256G1_scaffold_562_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13446..14408
DNA (963bp) protein (321aa)
Glutaconate CoA-transferase subunit A n=1 Tax=Clostridium sp. CAG:299 RepID=R7A9E8_9CLOT
Glutaconate CoA-transferase subunit A {ECO:0000313|EMBL:CDD39372.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
glutaconate CoA transferase subunit A
L2_059_256G1_scaffold_562_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14411..15220
DNA (810bp) protein (270aa)
glutaconate CoA-transferase subunit B (EC:2.8.3.12)
Glutaconate CoA-transferase subunit B n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZEI7_9CLOT
Glutaconate CoA-transferase subunit B {ECO:0000313|EMBL:CDD39371.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_059_256G1_scaffold_562_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15338..17104
DNA (1767bp) protein (589aa)
glutaconyl-CoA decarboxylase alpha subunit (EC:4.1.1.70)
Glutaconyl-CoA decarboxylase alpha subunit n=1 Tax=Clostridium sp. CAG:299 RepID=R6YZI2_9CLOT
Glutaconyl-CoA decarboxylase alpha subunit {ECO:0000313|EMBL:CDD39370.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_059_256G1_scaffold_562_16
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17413..18201
DNA (789bp) protein (263aa)
2-hydroxyglutaryl-CoA dehydratase activator protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z753_9CLOT
2-hydroxyglutaryl-CoA dehydratase activator protein {ECO:0000313|EMBL:CDD39369.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
2-hydroxyglutaryl-CoA dehydratase activator protein
L2_059_256G1_scaffold_562_17
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18232..19668
DNA (1437bp) protein (479aa)
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB n=1 Tax=Clostridium sp. CAG:299 RepID=R6YTQ9_9CLOT
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB {ECO:0000313|EMBL:CDD39368.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
L2_059_256G1_scaffold_562_18
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19673..20821
DNA (1149bp) protein (383aa)
2-hydroxyglutaryl-CoA dehydratase beta subunit (EC:4.2.1.-)
2-hydroxyglutaryl-CoA dehydratase beta subunit n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZEI2_9CLOT
2-hydroxyglutaryl-CoA dehydratase beta subunit {ECO:0000313|EMBL:CDD39366.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_059_256G1_scaffold_562_19
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21013..21774)
DNA (762bp) protein (254aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z7Q2_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CDD42235.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Transcriptional regulator
L2_059_256G1_scaffold_562_20
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21793..22242)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AI11_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD42237.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_059_256G1_scaffold_562_21
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22750..23034
DNA (285bp) protein (95aa)
10 kDa chaperonin n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z7Q8_9CLOT
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Co-chaperonin GroES (HSP10)
L2_059_256G1_scaffold_562_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23104..24726
DNA (1623bp) protein (541aa)
60 kDa chaperonin n=1 Tax=Clostridium sp. CAG:299 RepID=R7AI16_9CLOT
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
chaperonin GroL
L2_059_256G1_scaffold_562_23
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24878..25507)
DNA (630bp) protein (210aa)
Predicted metal-dependent phosphoesterases (PHP family) n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFL4_9CLOT
Predicted metal-dependent phosphoesterases (PHP family) {ECO:0000313|EMBL:CDD42244.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted metal-dependent phosphoesterases (PHP family)
L2_059_256G1_scaffold_562_24
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25839..26963
DNA (1125bp) protein (375aa)
ABC-type Fe3+ transport system periplasmic component n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZMM9_9CLOT
ABC-type Fe3+ transport system periplasmic component {ECO:0000313|EMBL:CDD42246.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type Fe3+ transport system, periplasmic component
L2_059_256G1_scaffold_562_25
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26971..28719
DNA (1749bp) protein (583aa)
ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AI21_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CDD42247.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type Fe3+ transport system, permease component
L2_059_256G1_scaffold_562_26
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28691..29131
DNA (441bp) protein (147aa)
ABC-type spermidine/putrescine transport systems ATPase components n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z1N9_9CLOT
ABC-type spermidine/putrescine transport systems ATPase components {ECO:0000313|EMBL:CDD42248.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type spermidine/putrescine transport systems, ATPase components
Displaying 26 items

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