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L2_059_256G1_scaffold_582

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_582_1
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..1092)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PXK1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14462.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
glutamate synthase
L2_059_256G1_scaffold_582_2
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1541..2746)
DNA (1206bp) protein (402aa)
Putative coproporphyrinogen III oxidase {ECO:0000313|EMBL:BAR01762.1}; Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EEB21947.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EEB21947.1};; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV11_9BIFI
coproporphyrinogen III oxidase
L2_059_256G1_scaffold_582_3
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2746..4626)
DNA (1881bp) protein (627aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
Elongation factor 4 n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV12_9BIFI
GTP-binding protein LepA
L2_059_256G1_scaffold_582_4
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4783..5043
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=3 Tax=Bifidobacterium RepID=B6XV13_9BIFI
30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_059_256G1_scaffold_582_5
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5143..5892)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV14_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR01759.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
membrane protein
L2_059_256G1_scaffold_582_6
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6067..7194)
DNA (1128bp) protein (376aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:KEF28337.1}; EC=2.6.1.42 {ECO:0000313|EMBL:KEF28337.1};; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=2 Tax=Bifidobacterium RepID=C0BT63_9BIFI
L2_059_256G1_scaffold_582_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7481..7666
DNA (186bp) protein (62aa)
RelE/StbE family addiction module toxin n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JES2_9FIRM
RelE/StbE family addiction module toxin {ECO:0000313|EMBL:EES76693.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_059_256G1_scaffold_582_8
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7610..8023)
DNA (414bp) protein (138aa)
Acetyltransferase, GNAT family n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV17_9BIFI
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEB21953.1}; Putative acetyltransferase {ECO:0000313|EMBL:BAR01757.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
acetyltransferase
L2_059_256G1_scaffold_582_9
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8109..8477)
DNA (369bp) protein (123aa)
Putative fluoride ion transporter CrcB n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV18_9BIFI
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
chromosome condensation protein CrcB
L2_059_256G1_scaffold_582_10
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8474..8983)
DNA (510bp) protein (170aa)
Putative fluoride ion transporter CrcB n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV19_9BIFI
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
camphor resistance CrcB protein
L2_059_256G1_scaffold_582_11
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9286..9882)
DNA (597bp) protein (199aa)
50S ribosomal protein L25 n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV21_9BIFI
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
50S ribosomal protein L25
L2_059_256G1_scaffold_582_12
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10166..11161
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV22_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB21958.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
alpha/beta hydrolase
L2_059_256G1_scaffold_582_13
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11202..11327
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV23_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB21959.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
Permease MFS superfamily
L2_059_256G1_scaffold_582_14
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11336..11716
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV24_9BIFI
Putative transport protein {ECO:0000313|EMBL:BAR01752.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
MFS transporter
L2_059_256G1_scaffold_582_15
unknown

Not on your lists

comp(11735..11878)
DNA (144bp) protein (48aa)

This feature has no annotations

L2_059_256G1_scaffold_582_16
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12080..14596
DNA (2517bp) protein (839aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P7E2_9BIFI
Excinuclease ATPase subunit {ECO:0000313|EMBL:BAR01751.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
excinuclease subunit A
L2_059_256G1_scaffold_582_17
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14662..15654)
DNA (993bp) protein (331aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta n=2 Tax=Bifidobacterium RepID=B6XV27_9BIFI
L2_059_256G1_scaffold_582_18
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15620..15760)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P169_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14439.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
L2_059_256G1_scaffold_582_19
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15792..17975)
DNA (2184bp) protein (728aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BT48_9BIFI
L2_059_256G1_scaffold_582_20
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17978..18412)
DNA (435bp) protein (145aa)
Protein NrdI n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV29_9BIFI
Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
ribonucleotide reductase
L2_059_256G1_scaffold_582_21
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18409..18642)
DNA (234bp) protein (78aa)
Glutaredoxin n=2 Tax=Bifidobacterium RepID=B6XV30_9BIFI
Glutaredoxin {ECO:0000313|EMBL:EEB21966.1}; Glutaredoxin-like protein {ECO:0000313|EMBL:BAR01747.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
glutaredoxin
L2_059_256G1_scaffold_582_22
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19141..19386
DNA (246bp) protein (82aa)
Transcriptional regulator, TetR family n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV32_9BIFI
Putative transcriptional regulator {ECO:0000313|EMBL:BAR01746.1}; Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEB21968.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
AcrR family transcriptional regulator
L2_059_256G1_scaffold_582_23
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19411..19797
DNA (387bp) protein (129aa)
Transcriptional regulator, TetR family n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV32_9BIFI
Putative transcriptional regulator {ECO:0000313|EMBL:BAR01746.1}; Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEB21968.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
AcrR family transcriptional regulator
L2_059_256G1_scaffold_582_24
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19871..21154
DNA (1284bp) protein (428aa)
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV33_9BIFI
Putative transport protein {ECO:0000313|EMBL:BAR01745.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
MFS transporter
L2_059_256G1_scaffold_582_25
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21747..23114)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV36_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB21972.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
riboflavin deaminase
L2_059_256G1_scaffold_582_26
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23359..24804)
DNA (1446bp) protein (482aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
NAD(P) transhydrogenase subunit beta n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV38_9BIFI
NAD(P) transhydrogenase subunit beta
L2_059_256G1_scaffold_582_27
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24805..25110)
DNA (306bp) protein (102aa)
NAD/NADP transhydrogenase alpha subunit-like protein (EC:1.6.1.2)
NAD/NADP transhydrogenase alpha subunit-like protein n=9 Tax=Bifidobacterium RepID=D2QA53_BIFDB
NAD(P) transhydrogenase alpha-2 subunit {ECO:0000313|EMBL:BAR01741.1}; Uncharacterized protein {ECO:0000313|EMBL:EEB21975.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
L2_059_256G1_scaffold_582_28
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25114..26259)
DNA (1146bp) protein (382aa)
Putative NAD(P)(+) transhydrogenase (AB-specific), alpha subunit n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV40_9BIFI
NAD(P) transhydrogenase alpha-1 subunit {ECO:0000313|EMBL:BAR01740.1}; Putative NAD(P)(+) transhydrogenase (AB-specific), alpha subunit {ECO:0000313|EMBL:EEB21976.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
NAD(P) transhydrogenase subunit alpha
L2_059_256G1_scaffold_582_29
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26498..28534
DNA (2037bp) protein (679aa)
AMP-binding enzyme n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV41_9BIFI
AMP-binding enzyme {ECO:0000313|EMBL:EEB21977.1}; Long-chain-fatty-acid-CoA ligase {ECO:0000313|EMBL:BAR01739.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
AMP-binding protein
L2_059_256G1_scaffold_582_30
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28671..29669)
DNA (999bp) protein (333aa)
GTPase Era n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV42_9BIFI
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
GTPase Era
Displaying items 1-30 of 37 in total

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