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L2_059_256G1_scaffold_593

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_593_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1817)
DNA (1815bp) protein (605aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
lon; ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YMA0_9FIRM
L2_059_256G1_scaffold_593_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1902..3218)
DNA (1317bp) protein (439aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=3 Tax=Clostridiales RepID=G9YM99_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
L2_059_256G1_scaffold_593_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3292..3873)
DNA (582bp) protein (194aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=3 Tax=Clostridiales RepID=G9YM98_9FIRM
L2_059_256G1_scaffold_593_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3977..5398)
DNA (1422bp) protein (474aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Trigger factor n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7F4_9FIRM
tig; trigger factor
L2_059_256G1_scaffold_593_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5519..6199)
DNA (681bp) protein (227aa)
Ser/Thr phosphatase family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YM96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55748.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative hydrolase
L2_059_256G1_scaffold_593_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6200..7687)
DNA (1488bp) protein (496aa)
thrC; threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7F6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55749.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_059_256G1_scaffold_593_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7675..8640)
DNA (966bp) protein (322aa)
membrane dipeptidase (EC:3.4.13.19)
Renal dipeptidase family protein n=2 Tax=Clostridiales RepID=U2C0U5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF55750.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_059_256G1_scaffold_593_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8653..9024)
DNA (372bp) protein (124aa)
UPF0102 protein HMPREF0372_00614 n=3 Tax=Clostridiales RepID=G9YM93_9FIRM
UPF0102 protein HMPREF0995_00386 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_059_256G1_scaffold_593_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9021..9635)
DNA (615bp) protein (205aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=2 Tax=Clostridiales RepID=G9YM92_9FIRM
L2_059_256G1_scaffold_593_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9622..10506)
DNA (885bp) protein (295aa)
Ribosome biogenesis GTPase A n=3 Tax=Clostridiales RepID=H1C7G0_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative GTP-binding protein
L2_059_256G1_scaffold_593_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10630..12636)
DNA (2007bp) protein (669aa)
Amidohydrolase family protein n=3 Tax=Clostridiales RepID=G9YM90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35526.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_059_256G1_scaffold_593_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12892..13233)
DNA (342bp) protein (114aa)
50S ribosomal protein L19 n=3 Tax=Clostridiales RepID=G9YM89_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
rplS; 50S ribosomal protein L19
L2_059_256G1_scaffold_593_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13371..13970)
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7G3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55756.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
peptidase M50 family protein
L2_059_256G1_scaffold_593_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13971..14996)
DNA (1026bp) protein (342aa)
Peptidase, M23 family n=2 Tax=Clostridiales RepID=G9YM87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55757.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative metalloendopeptidase
L2_059_256G1_scaffold_593_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15548..15931
DNA (384bp) protein (128aa)
DNA-binding helix-turn-helix protein n=2 Tax=Clostridiales RepID=G9YX20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35530.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_059_256G1_scaffold_593_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15933..16262
DNA (330bp) protein (110aa)
Sporulation initiation factor Spo0A n=3 Tax=Clostridiales RepID=G9YX21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35531.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
stage 0 sporulation protein A
L2_059_256G1_scaffold_593_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16304..16732
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YX22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55760.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_059_256G1_scaffold_593_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16858..17385
DNA (528bp) protein (176aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7G8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55761.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ECF subfamily RNA polymerase sigma-24 factor
L2_059_256G1_scaffold_593_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17382..18791
DNA (1410bp) protein (470aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7G9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55762.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_059_256G1_scaffold_593_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18952..19650
DNA (699bp) protein (233aa)
Response regulator receiver domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YX25_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EHM37997.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_059_256G1_scaffold_593_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19625..21607
DNA (1983bp) protein (661aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7H1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35536.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
integral membrane sensor signal transduction histidine kinase
L2_059_256G1_scaffold_593_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21878..23284
DNA (1407bp) protein (469aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7H2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35537.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
multidrug resistance protein, MATE family
L2_059_256G1_scaffold_593_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23535..24299)
DNA (765bp) protein (255aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CYZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF55766.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
4Fe-4S ferredoxin
L2_059_256G1_scaffold_593_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24684..26558)
DNA (1875bp) protein (625aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7H5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55768.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ABC-type multidrug transport system, ATPase and permease components
L2_059_256G1_scaffold_593_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26551..28245)
DNA (1695bp) protein (565aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=G9YX31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35541.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC-type multidrug transport system, ATPase and permease components
Displaying 25 items

View Taxonomy