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L2_059_256G1_scaffold_616

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_616_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..703
DNA (702bp) protein (234aa)
Ammonium transporter n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1P7_9FIRM
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002, ECO:0000313|EMBL:CBL25159.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_256G1_scaffold_616_2
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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754..1119
DNA (366bp) protein (122aa)
Nitrogen regulatory protein P-II n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PAA4_9FIRM
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:CDC17649.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
nitrogen regulatory protein P-II
L2_059_256G1_scaffold_616_3
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1169..2317)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NZV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17648.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Cobalamin biosynthesis protein CbiG
L2_059_256G1_scaffold_616_4
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2345..2881)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q6T2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17647.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_256G1_scaffold_616_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3070..4776
DNA (1707bp) protein (569aa)
Subtilase family n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1P4_9FIRM
Subtilase family {ECO:0000313|EMBL:CBL25156.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Subtilase family.
L2_059_256G1_scaffold_616_6
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4735..4860)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P2I1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17645.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_256G1_scaffold_616_7
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4835..6088)
DNA (1254bp) protein (418aa)
Sodium/proton-potassium antiporter GerN CPA2 family (TC 2.A.37.2.2) n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PAA1_9FIRM
Sodium/proton-potassium antiporter GerN CPA2 family (TC 2.A.37.2.2) {ECO:0000313|EMBL:CDC17644.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
sodium/proton-potassium antiporter GerN, CPA2 family (TC 2.A.37.2.2)
L2_059_256G1_scaffold_616_8
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6180..7649)
DNA (1470bp) protein (490aa)
Endopeptidase Clp ATP-binding regulatory subunit (ClpX) n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NZV4_9FIRM
Endopeptidase Clp ATP-binding regulatory subunit (ClpX) {ECO:0000313|EMBL:CDC17643.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
endopeptidase Clp ATP-binding regulatory subunit (clpX)
L2_059_256G1_scaffold_616_9
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7663..8688)
DNA (1026bp) protein (342aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q6S7_9FIRM
L2_059_256G1_scaffold_616_10
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8707..11127)
DNA (2421bp) protein (807aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1P1_9FIRM
L2_059_256G1_scaffold_616_11
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11217..12236)
DNA (1020bp) protein (340aa)
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Clostridiales RepID=D4M1P0_9FIRM
L2_059_256G1_scaffold_616_12
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(12769..13581)
DNA (813bp) protein (271aa)
Conserved domain protein n=1 Tax=Streptococcus infantis SK970 RepID=F9PWL0_9STRE
Surface-anchored protein {ECO:0000313|EMBL:KJQ62972.1}; TaxID=28037 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis.;"
hypothetical protein
L2_059_256G1_scaffold_616_13
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13908..14747)
DNA (840bp) protein (280aa)
Predicted membrane protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PZE8_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDC15062.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Predicted membrane protein
L2_059_256G1_scaffold_616_14
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15293..15628)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1N8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25150.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_256G1_scaffold_616_15
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15645..17132)
DNA (1488bp) protein (496aa)
L-threonine synthase (EC:4.2.3.1)
L-threonine synthase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NV40_9FIRM
L-threonine synthase {ECO:0000313|EMBL:CDC15060.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_256G1_scaffold_616_16
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17264..18562)
DNA (1299bp) protein (433aa)
Na+/H+ antiporter n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1N6_9FIRM
Na+/H+ antiporter
Na+/H+ antiporter {ECO:0000313|EMBL:CBL25148.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_256G1_scaffold_616_17
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18695..19780)
DNA (1086bp) protein (362aa)
aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase (Non-peptidoglycan organisms) n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PZE4_9FIRM
Aspartate-semialdehyde dehydrogenase (Non-peptidoglycan organisms) {ECO:0000313|EMBL:CDC15057.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_256G1_scaffold_616_18
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19896..21275)
DNA (1380bp) protein (460aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P957_9FIRM
L2_059_256G1_scaffold_616_19
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21432..22070)
DNA (639bp) protein (213aa)
Uncharacterized protein conserved in bacteria n=2 Tax=Clostridiales RepID=D4M1N3_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL25145.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_256G1_scaffold_616_20
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22205..22972
DNA (768bp) protein (256aa)
ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NSC2_9FIRM
ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component {ECO:0000313|EMBL:CDC15053.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L2_059_256G1_scaffold_616_21
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22962..23753
DNA (792bp) protein (264aa)
ABC-type nitrate/sulfonate/bicarbonate transport system permease component n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P953_9FIRM
ABC-type nitrate/sulfonate/bicarbonate transport system permease component {ECO:0000313|EMBL:CDC15051.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
L2_059_256G1_scaffold_616_22
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23777..24895)
DNA (1119bp) protein (373aa)
Nitrogenase molybdenum-iron protein alpha and beta chains n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PZD7_9FIRM
Nitrogenase molybdenum-iron protein alpha and beta chains {ECO:0000313|EMBL:CDC15047.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Nitrogenase molybdenum-iron protein, alpha and beta chains
L2_059_256G1_scaffold_616_23
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24892..26277)
DNA (1386bp) protein (462aa)
Nitrogenase component 1 type Oxidoreductase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PZD2_9FIRM
Nitrogenase component 1 type Oxidoreductase {ECO:0000313|EMBL:CDC15042.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Nitrogenase component 1 type Oxidoreductase.
L2_059_256G1_scaffold_616_24
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26270..27046)
DNA (777bp) protein (259aa)
Nitrogenase subunit NifH (ATPase) (EC:1.18.6.1)
Nitrogenase subunit NifH (ATPase) n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P948_9FIRM
Nitrogenase subunit NifH (ATPase) {ECO:0000313|EMBL:CDC15041.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_256G1_scaffold_616_25
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27039..27311)
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R6NV22_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25138.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_256G1_scaffold_616_26
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27413..27610)
DNA (198bp) protein (66aa)
Hydrogenase expression/formation protein HypE n=2 Tax=Clostridiales RepID=D4M1M5_9FIRM
hydrogenase expression/formation protein HypE
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:CDC15039.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Displaying 26 items

View Taxonomy