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L2_059_256G1_scaffold_646

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_646_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..287
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E661_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR76035.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_059_256G1_scaffold_646_2
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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323..1105
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U5Q1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC75416.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L2_059_256G1_scaffold_646_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1368..1721
DNA (354bp) protein (118aa)
UPF0102 protein ERE_30240 n=3 Tax=Eubacterium RepID=D4JNZ8_9FIRM
conserved hypothetical protein TIGR00252
UPF0102 protein ERE_30240 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_059_256G1_scaffold_646_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1864..2838
DNA (975bp) protein (325aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E656_9FIRM
conserved hypothetical protein TIGR00726
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_059_256G1_scaffold_646_5
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2872..2964
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TPU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC75428.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_059_256G1_scaffold_646_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3017..3466
DNA (450bp) protein (150aa)
Transcriptional regulator, GntR family n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E655_9FIRM
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CBK90895.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_059_256G1_scaffold_646_7
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3450..4355
DNA (906bp) protein (302aa)
ABC-type multidrug transport system, ATPase component n=2 Tax=Eubacterium RepID=D4JP01_9FIRM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CDC75433.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_059_256G1_scaffold_646_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4330..6255
DNA (1926bp) protein (642aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JP02_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK94821.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_059_256G1_scaffold_646_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6382..7707
DNA (1326bp) protein (442aa)
GTPase Der n=4 Tax=Eubacterium RepID=DER_EUBR3
ribosome-associated GTPase EngA
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_059_256G1_scaffold_646_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7709..8353
DNA (645bp) protein (215aa)
Glycerol-3-phosphate acyltransferase n=4 Tax=Eubacterium RepID=C4ZD62_EUBR3
hypothetical protein
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_059_256G1_scaffold_646_11
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8402..9412
DNA (1011bp) protein (337aa)
glycerol 3-phosphate dehydrogenase (NAD(P)+) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=3 Tax=Eubacterium RepID=D4JP05_9FIRM
L2_059_256G1_scaffold_646_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9484..9921
DNA (438bp) protein (146aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|SAAS:SAAS00071038}; EC=3.6.1.23 {ECO:0000256|SAAS:SAAS00071036};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Deoxyuridine 5-triphosphate nucleotidohydrolase Dut n=3 Tax=Eubacterium rectale RepID=C4ZD60_EUBR3
L2_059_256G1_scaffold_646_13
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9975..10613
DNA (639bp) protein (213aa)
Orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=4 Tax=Eubacterium RepID=D4JP07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ACR76022.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_059_256G1_scaffold_646_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10829..11941
DNA (1113bp) protein (371aa)
ABC-type sugar/spermidine/putrescine/iron/thiamine transport system, ATPase component n=4 Tax=Eubacterium RepID=C4ZD58_EUBR3
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
ABC-type sugar/spermidine/putrescine/iron/thiamine transport system, ATPase component {ECO:0000313|EMBL:ACR76021.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_059_256G1_scaffold_646_15
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12129..13226
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U5U3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC75451.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L2_059_256G1_scaffold_646_16
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13265..15187
DNA (1923bp) protein (641aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA topoisomerase IV subunit B n=2 Tax=Eubacterium RepID=D6E645_9FIRM
DNA topoisomerase IV subunit B {ECO:0000313|EMBL:CDC75452.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_059_256G1_scaffold_646_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15259..17514
DNA (2256bp) protein (752aa)
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit (EC:5.99.1.3)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954, ECO:0000313|EMBL:CBK94830.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit n=1 Tax=Eubacterium rectale M104/1 RepID=D4JP11_9FIRM
L2_059_256G1_scaffold_646_18
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17611..18528
DNA (918bp) protein (306aa)
Probable nitric-oxide reductase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TTG4_9FIRM
Probable nitric-oxide reductase {ECO:0000313|EMBL:CDC75455.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
putative nitric-oxide reductase
L2_059_256G1_scaffold_646_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18562..20304
DNA (1743bp) protein (581aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E643_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK90883.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_059_256G1_scaffold_646_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20351..21004
DNA (654bp) protein (218aa)
Predicted phosphatase, HAD family n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZD52_EUBR3
putative phosphatase, HAD family
Predicted phosphatase, HAD family {ECO:0000313|EMBL:ACR76015.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_059_256G1_scaffold_646_21
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21068..21847
DNA (780bp) protein (260aa)
CAAX amino terminal protease family n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U5V4_9FIRM
CAAX amino terminal protease family {ECO:0000313|EMBL:CDC75461.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
CAAX amino terminal protease family.
L2_059_256G1_scaffold_646_22
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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21858..22841
DNA (984bp) protein (328aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Roseburia sp. CAG:182 RepID=R7QXU7_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CDF43024.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
AraC-type DNA-binding domain-containing proteins
L2_059_256G1_scaffold_646_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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22944..23591
DNA (648bp) protein (216aa)
beta-phosphoglucomutase (EC:5.4.2.6)
Beta-phosphoglucomutase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBL2_9FIRM
Beta-phosphoglucomutase {ECO:0000313|EMBL:CCZ78122.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_059_256G1_scaffold_646_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23572..26067)
DNA (2496bp) protein (832aa)
Beta-xylosidase (EC:3.2.1.37)
Beta-xylosidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3X7_9FIRM
Beta-xylosidase {ECO:0000313|EMBL:CCZ78121.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_059_256G1_scaffold_646_25
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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26303..26770
DNA (468bp) protein (156aa)
ABC-type sugar transport system, ATPase component (EC:3.6.3.17)
ABC-type sugar transport system ATPase component n=1 Tax=Roseburia sp. CAG:182 RepID=R7R016_9FIRM
ABC-type sugar transport system ATPase component {ECO:0000313|EMBL:CDF43021.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
Displaying 25 items

View Taxonomy