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L2_059_256G1_scaffold_658

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_658_1
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(40..156)
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=58 Tax=Bacteroides RepID=RL36_BACFN
rpmJ; putative 30S ribosomal protein S13
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
L2_059_256G1_scaffold_658_2
Bacteroides coprophilus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(165..383)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=85 Tax=root RepID=IF1_BACFN
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=547042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprophilus DSM 18228 = JCM 13818.;"
L2_059_256G1_scaffold_658_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(385..1182)
DNA (798bp) protein (266aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=2 Tax=Bacteroides caccae RepID=A5ZBJ2_9BACE
L2_059_256G1_scaffold_658_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1198..2541)
DNA (1344bp) protein (448aa)
Protein translocase subunit SecY n=3 Tax=root RepID=A5ZBJ1_9BACE
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
secY; preprotein translocase subunit SecY
L2_059_256G1_scaffold_658_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2546..2992)
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=2 Tax=Bacteroides caccae RepID=A5ZBJ0_9BACE
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
LSU ribosomal protein L15P
L2_059_256G1_scaffold_658_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(3024..3200)
DNA (177bp) protein (59aa)
50S ribosomal protein L30 n=35 Tax=Bacteroides RepID=RL30_BACFN
rpmD; putative 50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L2_059_256G1_scaffold_658_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(3210..3728)
DNA (519bp) protein (173aa)
30S ribosomal protein S5 n=2 Tax=Bacteroides caccae RepID=A5ZBI8_9BACE
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
SSU ribosomal protein S5P
L2_059_256G1_scaffold_658_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(3734..4078)
DNA (345bp) protein (115aa)
50S ribosomal protein L18 n=2 Tax=Bacteroides caccae RepID=A5ZBI7_9BACE
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
LSU ribosomal protein L18P
L2_059_256G1_scaffold_658_9
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4100..4669)
DNA (570bp) protein (190aa)
50S ribosomal protein L6 n=12 Tax=root RepID=A5ZBI6_9BACE
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
LSU ribosomal protein L6P
L2_059_256G1_scaffold_658_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(4687..5082)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=2 Tax=Bacteroides caccae RepID=A5ZBI5_9BACE
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
rpsH; 30S ribosomal protein S8
L2_059_256G1_scaffold_658_11
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(5136..5435)
DNA (300bp) protein (100aa)
30S ribosomal protein S14 n=14 Tax=Bacteroides RepID=D6CXN6_9BACE
SSU ribosomal protein S14P
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
L2_059_256G1_scaffold_658_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(5441..5998)
DNA (558bp) protein (186aa)
50S ribosomal protein L5 n=7 Tax=Bacteroides RepID=RL5_BACTN
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L2_059_256G1_scaffold_658_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(6001..6318)
DNA (318bp) protein (106aa)
50S ribosomal protein L24 n=18 Tax=Bacteroides RepID=D6CXN8_9BACE
LSU ribosomal protein L24P
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L2_059_256G1_scaffold_658_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(6339..6704)
DNA (366bp) protein (122aa)
50S ribosomal protein L14 n=41 Tax=Bacteroides RepID=RL14_BACFN
rplN; putative 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L2_059_256G1_scaffold_658_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(6707..6964)
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=2 Tax=Bacteroides caccae RepID=A5ZBI0_9BACE
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
rpsQ; 30S ribosomal protein S17
L2_059_256G1_scaffold_658_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(6973..7170)
DNA (198bp) protein (66aa)
50S ribosomal protein L29 n=2 Tax=Bacteroides caccae RepID=A5ZBH9_9BACE
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
rpmC; 50S ribosomal protein L29
L2_059_256G1_scaffold_658_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(7176..7610)
DNA (435bp) protein (145aa)
50S ribosomal protein L16 n=30 Tax=Bacteroides RepID=D6CXP2_9BACE
50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L2_059_256G1_scaffold_658_18
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(7634..8365)
DNA (732bp) protein (244aa)
30S ribosomal protein S3 n=4 Tax=Bacteroides RepID=A5ZBH7_9BACE
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=483215 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii DSM 17565.;"
rpsC; 30S ribosomal protein S3
L2_059_256G1_scaffold_658_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(8371..8781)
DNA (411bp) protein (137aa)
50S ribosomal protein L22 n=4 Tax=Bacteroides RepID=A5ZBH6_9BACE
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
LSU ribosomal protein L22P
L2_059_256G1_scaffold_658_20
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(8817..9086)
DNA (270bp) protein (90aa)
30S ribosomal protein S19 n=18 Tax=Bacteroides RepID=D6CXP5_9BACE
SSU ribosomal protein S19P
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
L2_059_256G1_scaffold_658_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(9107..9931)
DNA (825bp) protein (275aa)
50S ribosomal protein L2 n=16 Tax=Bacteroides RepID=A5ZBH4_9BACE
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
LSU ribosomal protein L2P
L2_059_256G1_scaffold_658_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(9937..10227)
DNA (291bp) protein (97aa)
50S ribosomal protein L23 n=2 Tax=Bacteroides caccae RepID=A5ZBH3_9BACE
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
rplW; 50S ribosomal protein L23
L2_059_256G1_scaffold_658_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(10244..10870)
DNA (627bp) protein (209aa)
50S ribosomal protein L4 n=2 Tax=Bacteroides caccae RepID=A5ZBH2_9BACE
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
LSU ribosomal protein L4P
L2_059_256G1_scaffold_658_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(10870..11487)
DNA (618bp) protein (206aa)
50S ribosomal protein L3 n=2 Tax=Bacteroides caccae RepID=A5ZBH1_9BACE
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
LSU ribosomal protein L3P
L2_059_256G1_scaffold_658_25
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(11506..11811)
DNA (306bp) protein (102aa)
30S ribosomal protein S10 n=51 Tax=root RepID=RS10_BACTN
SSU ribosomal protein S10P
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L2_059_256G1_scaffold_658_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11892..14009)
DNA (2118bp) protein (706aa)
Elongation factor G n=2 Tax=Bacteroides caccae RepID=A5ZBG9_9BACE
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
fusA; elongation factor G
L2_059_256G1_scaffold_658_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(14057..14533)
DNA (477bp) protein (159aa)
30S ribosomal protein S7 n=5 Tax=Bacteroides RepID=A5ZBG8_9BACE
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
SSU ribosomal protein S7P
L2_059_256G1_scaffold_658_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(14676..15077)
DNA (402bp) protein (134aa)
30S ribosomal protein S12 n=26 Tax=root RepID=RS12_BACFN
rpsL; putative 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
L2_059_256G1_scaffold_658_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15214..15522)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V0X4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18897.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Protein of unknown function (DUF3467).
L2_059_256G1_scaffold_658_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15664..19947)
DNA (4284bp) protein (1428aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=2 Tax=Bacteroides caccae RepID=A5ZBG5_9BACE
Displaying items 1-30 of 36 in total

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