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L2_059_256G1_scaffold_766

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_766_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1945)
DNA (1944bp) protein (648aa)
ATP-binding cassette, subfamily B, bacterial n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE67_9FIRM
ATP-binding cassette, subfamily B, bacterial {ECO:0000313|EMBL:EGJ46367.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ABC transporter
L2_059_256G1_scaffold_766_2
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(1945..3720)
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YAB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13348.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
ABC transporter
L2_059_256G1_scaffold_766_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3742..4212)
DNA (471bp) protein (157aa)
transcriptional regulator n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B432F8
Uncharacterized protein {ECO:0000313|EMBL:EGJ46365.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_059_256G1_scaffold_766_4
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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4478..5095
DNA (618bp) protein (206aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSX9_9FIRM
L2_059_256G1_scaffold_766_5
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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5111..5557
DNA (447bp) protein (149aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSY2_9FIRM
methylated-DNA--protein-cysteine methyltransferase
L2_059_256G1_scaffold_766_6
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5554..5790
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KSV0_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL00167.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L2_059_256G1_scaffold_766_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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5794..6552
DNA (759bp) protein (253aa)
Exodeoxyribonuclease III n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YR19_9FIRM
Exodeoxyribonuclease {ECO:0000313|EMBL:KGF57484.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
exodeoxyribonuclease III Xth
L2_059_256G1_scaffold_766_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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6549..7355
DNA (807bp) protein (269aa)
S4 domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NR04_9FIRM
S4 domain protein {ECO:0000313|EMBL:EDN01500.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_059_256G1_scaffold_766_9
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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7394..7606
DNA (213bp) protein (71aa)
UPF0291 protein BACCAP_00627 n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NR03_9FIRM
UPF0291 protein BACCAP_00627 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_059_256G1_scaffold_766_10
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7619..8857
DNA (1239bp) protein (413aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V581_CLOSS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK47910.1}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
L2_059_256G1_scaffold_766_11
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(8921..9427)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AQN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45695.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
CarD-like protein
L2_059_256G1_scaffold_766_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9736..11106)
DNA (1371bp) protein (457aa)
serine protease (EC:3.4.21.-)
Serine protease do-like HtrA family protein n=3 Tax=Clostridiales RepID=G9YR24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35270.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_059_256G1_scaffold_766_13
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11187..12365)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00539.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
sporulation integral membrane protein YtvI
L2_059_256G1_scaffold_766_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12456..13631)
DNA (1176bp) protein (392aa)
Stage II sporulation protein P n=2 Tax=Clostridiales RepID=G9YR20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57485.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
spoIIP; stage II sporulation protein P
L2_059_256G1_scaffold_766_15
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13914..14756
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NT62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00625.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
degV family protein
L2_059_256G1_scaffold_766_16
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14838..15422
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01801.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
putative HD superfamily hydrolase
L2_059_256G1_scaffold_766_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15428..16813
DNA (1386bp) protein (462aa)
MATE efflux family protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8D0_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHO35180.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
MATE efflux family protein
L2_059_256G1_scaffold_766_18
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16831..17334
DNA (504bp) protein (168aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQG6_9FIRM
L2_059_256G1_scaffold_766_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17352..18104
DNA (753bp) protein (251aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9XM85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ46526.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
putative GntR family transcriptional regulator
L2_059_256G1_scaffold_766_20
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

18313..19275
DNA (963bp) protein (321aa)
methenyltetrahydromethanopterin cyclohydrolase (EC:3.5.4.27)
Methenyltetrahydromethanopterin cyclohydrolase {ECO:0000313|EMBL:ADK81949.1}; EC=3.5.4.27 {ECO:0000313|EMBL:ADK81949.1};; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI000368C8D0
L2_059_256G1_scaffold_766_21
unknown

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19291..19968
DNA (678bp) protein (226aa)

This feature has no annotations

L2_059_256G1_scaffold_766_22
unknown

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20138..20320
DNA (183bp) protein (61aa)

This feature has no annotations

L2_059_256G1_scaffold_766_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20494..22353
DNA (1860bp) protein (620aa)
Superfamily II DNA and RNA helicases (EC:3.6.1.-)
Putative ATP-dependent RNA helicase RhlE n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVE1_9FIRM
Putative ATP-dependent RNA helicase RhlE {ECO:0000313|EMBL:EHM40436.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_059_256G1_scaffold_766_24
unknown

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comp(22404..22850)
DNA (447bp) protein (149aa)

This feature has no annotations

L2_059_256G1_scaffold_766_25
unknown

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comp(22902..23786)
DNA (885bp) protein (295aa)

This feature has no annotations

Displaying 25 items

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