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L2_059_256G1_scaffold_883

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_883_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..97)
DNA (96bp) protein (32aa)
50S ribosomal protein L28 n=48 Tax=Enterobacteriaceae RepID=RL28_ENT38
rpmB; 50S ribosomal protein L28,50S ribosomal protein L28,50S ribosomal protein L28,Ribosomal protein L28,ribosomal protein L28,Ribosomal L28 family
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1169333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE14.;"
L2_059_256G1_scaffold_883_2
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(363..1028)
DNA (666bp) protein (222aa)
UPF0758 protein D782_0088 n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0LX37_ENTBF
UPF0758 protein GKAS_02578 {ECO:0000256|HAMAP-Rule:MF_00018}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
DNA replication and repair protein RadC
L2_059_256G1_scaffold_883_3
Enterobacteriaceae bacterium strain FGI 57, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1192..2415
DNA (1224bp) protein (408aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0LYM7_ENTBF
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:AGB76167.1}; TaxID=693444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae.;" source="Enterobacteriaceae bacterium (strain FGI 57).;"
L2_059_256G1_scaffold_883_4
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2393..2851
DNA (459bp) protein (153aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=11 Tax=Enterobacteriaceae RepID=DUT_CITK8
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
L2_059_256G1_scaffold_883_5
Escherichia albertii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3004..3600
DNA (597bp) protein (199aa)
Nucleoid occlusion factor SlmA n=1 Tax=Escherichia albertii TW07627 RepID=B1EIE9_9ESCH
Nucleoid occlusion factor SlmA {ECO:0000256|HAMAP-Rule:MF_01839, ECO:0000256|SAAS:SAAS00010477}; TaxID=502347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia albertii (strain TW07627).;"
transcriptional regulator domain-containing protein
L2_059_256G1_scaffold_883_6
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3637..4278)
DNA (642bp) protein (214aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
Orotate phosphoribosyltransferase n=2 Tax=Klebsiella oxytoca RepID=H3N4J5_KLEOX
pyrE; orotate phosphoribosyltransferase
L2_059_256G1_scaffold_883_7
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4342..5058)
DNA (717bp) protein (239aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH n=4 Tax=Enterobacter cloacae RepID=D5CAG7_ENTCC
L2_059_256G1_scaffold_883_8
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5309..6172
DNA (864bp) protein (288aa)
Uncharacterized protein n=7 Tax=Klebsiella RepID=B5XTF3_KLEP3
YicC family protein {ECO:0000313|EMBL:KFC99483.1}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
YicC domain-containing protein
L2_059_256G1_scaffold_883_9
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6366..7628
DNA (1263bp) protein (421aa)
integrase n=1 Tax=Yersinia enterocolitica RepID=UPI0003157215
Integrase {ECO:0000313|EMBL:KJX37431.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
integrase
L2_059_256G1_scaffold_883_10
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7686..8039)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Cubana str. CFSAN001083 RepID=V2L7Q5_SALET
Uncharacterized protein {ECO:0000313|EMBL:ESJ17719.1}; TaxID=1173780 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15 str.; 01-0170.;"
hypothetical protein
L2_059_256G1_scaffold_883_11
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8060..8605)
DNA (546bp) protein (182aa)
Uncharacterized protein n=7 Tax=Enterobacteriaceae RepID=B4TZZ0_SALSV
Uncharacterized protein {ECO:0000313|EMBL:KJX37430.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
hypothetical protein
L2_059_256G1_scaffold_883_12
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8851..9225
DNA (375bp) protein (125aa)
DNA-binding protein n=1 Tax=Yersinia enterocolitica RepID=UPI0002D87DB0
DNA-binding protein {ECO:0000313|EMBL:KJX37429.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
hypothetical protein
L2_059_256G1_scaffold_883_13
unknown

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comp(9437..9577)
DNA (141bp) protein (47aa)

This feature has no annotations

L2_059_256G1_scaffold_883_14
Enterobacter asburiae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9703..9897
DNA (195bp) protein (65aa)
Phage transcriptional regulator AlpA n=1 Tax=Escherichia coli O32:H37 str. P4 RepID=I2I575_ECOLX
Transcriptional regulator {ECO:0000313|EMBL:KJM16600.1}; TaxID=61645 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter asburiae.;"
phage transcriptional regulator AlpA
L2_059_256G1_scaffold_883_15
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10029..11063
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15 str. 01-0170 RepID=V2ITE7_SALDZ
Uncharacterized protein {ECO:0000313|EMBL:ESJ17714.1}; TaxID=1173780 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15 str.; 01-0170.;"
hypothetical protein
L2_059_256G1_scaffold_883_16
Yersinia enterocolitica, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11282..11920)
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Klebsiella RepID=F3QG14_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:AKF38571.1}; TaxID=630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia enterocolitica.;"
hypothetical protein
L2_059_256G1_scaffold_883_17
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11917..13899)
DNA (1983bp) protein (661aa)
Uncharacterized protein n=2 Tax=Klebsiella RepID=F3QG13_9ENTR
DNA helicase {ECO:0000313|EMBL:ETB82685.1}; TaxID=1410932 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Give var. 15 str.; CFSAN004343.;"
hypothetical protein
L2_059_256G1_scaffold_883_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14100..15227)
DNA (1128bp) protein (376aa)
Helix-turn-helix family protein n=1 Tax=Escherichia coli TW07509 RepID=U0M9U2_ECOLX
Helix-turn-helix family protein {ECO:0000313|EMBL:KDX23207.1}; TaxID=1444231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S4_C2.;"
putative Zn peptidase
L2_059_256G1_scaffold_883_19
Edwardsiella piscicida, Edwardsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15231..15845)
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Aeromonas veronii RepID=K1IR29_9GAMM
Iron-dependent peroxidase {ECO:0000313|EMBL:GAJ68026.1}; TaxID=1263550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella.;" source="Edwardsiella piscicida.;"
iron-dependent peroxidase
L2_059_256G1_scaffold_883_20
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16392..18125
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. indica serovar 6,14,25:z10:1,(2),7 str. 1121 RepID=V1H5M2_SALCE
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ESE87888.1}; TaxID=1173950 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. indica serovar 6,14,25:z10:1,(2),7 str.; 1121.;"
L2_059_256G1_scaffold_883_21
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18370..18987
DNA (618bp) protein (206aa)
Uncharacterized protein family UPF0126 n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2S800_ENTAL
Putative inner membrane protein {ECO:0000313|EMBL:KFC99485.1}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
hypothetical protein
L2_059_256G1_scaffold_883_22
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18984..20663)
DNA (1680bp) protein (560aa)
DNA ligase B {ECO:0000256|HAMAP-Rule:MF_01587, ECO:0000256|SAAS:SAAS00019096}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01587, ECO:0000256|SAAS:SAAS00019091};; Polydeoxyribonucleotide synthase [NAD(+)] B {ECO:0000256|HAMAP-Rule:MF_01587}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
DNA ligase n=1 Tax=Enterobacter aerogenes RepID=UPI00036E7B95
NAD-dependent DNA ligase
L2_059_256G1_scaffold_883_23
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20917..21540
DNA (624bp) protein (208aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Shigella flexneri 1235-66 RepID=I6HDM3_SHIFL
L2_059_256G1_scaffold_883_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21594..21686
DNA (93bp) protein (31aa)
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C2.;"
DNA-directed RNA polymerase subunit omega n=1 Tax=Vibrio cholerae CP1047(20) RepID=J1ZSF1_VIBCL
Displaying 24 items

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