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L2_059_256G1_scaffold_1159

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_1159_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..796)
DNA (795bp) protein (265aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
Shikimate dehydrogenase n=7 Tax=Clostridium difficile RepID=G6BDW5_CLODI
ydiB; shikimate 5-dehydrogenase
L2_059_256G1_scaffold_1159_2
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1008..1892
DNA (885bp) protein (295aa)
LysR family transcriptional regulator transcription activator of glutamate synthase operon n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDI8_9FIRM
LysR family transcriptional regulator transcription activator of glutamate synthase operon {ECO:0000313|EMBL:CDE37386.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Transcriptional regulator
L2_059_256G1_scaffold_1159_3
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2100..2606)
DNA (507bp) protein (169aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Shikimate kinase n=2 Tax=Megasphaera RepID=G0VLC0_MEGEL
shikimate kinase
L2_059_256G1_scaffold_1159_4
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2596..3429)
DNA (834bp) protein (278aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Shikimate dehydrogenase n=2 Tax=Megasphaera RepID=S7HNM0_9FIRM
shikimate 5-dehydrogenase
L2_059_256G1_scaffold_1159_5
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3430..4281)
DNA (852bp) protein (284aa)
p-protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MVF8_9FIRM
P-protein
p-protein {ECO:0000313|EMBL:CDF05164.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L2_059_256G1_scaffold_1159_6
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4281..5372)
DNA (1092bp) protein (364aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Chorismate synthase n=2 Tax=Megasphaera RepID=S7HNG4_9FIRM
chorismate synthase
L2_059_256G1_scaffold_1159_7
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(5374..6660)
DNA (1287bp) protein (429aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MXV6_9FIRM
3-phosphoshikimate 1-carboxyvinyltransferase
L2_059_256G1_scaffold_1159_8
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(6657..7730)
DNA (1074bp) protein (358aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
3-dehydroquinate synthase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MZ84_9FIRM
3-dehydroquinate synthase
L2_059_256G1_scaffold_1159_9
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(7711..8598)
DNA (888bp) protein (296aa)
Prephenate dehydrogenase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MZD1_9FIRM
Prephenate dehydrogenase {ECO:0000313|EMBL:CDF05168.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
prephenate dehydrogenase
L2_059_256G1_scaffold_1159_10
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(8616..9638)
DNA (1023bp) protein (341aa)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EPP18992.1}; EC=2.5.1.54 {ECO:0000313|EMBL:EPP18992.1};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
3-deoxy-7-phosphoheptulonate synthase n=2 Tax=Megasphaera RepID=S7HTN5_9FIRM
3-deoxy-7-phosphoheptulonate synthase
L2_059_256G1_scaffold_1159_11
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(9731..9898)
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=R7MX63_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC72508.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_059_256G1_scaffold_1159_12
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(10064..10969)
DNA (906bp) protein (302aa)
Polysaccharide deacetylase n=2 Tax=Megasphaera RepID=G0VLC9_MEGEL
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:EPP18991.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L2_059_256G1_scaffold_1159_13
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(10975..11763)
DNA (789bp) protein (263aa)
Selenium-dependent hydroxylase accessory protein YqeC n=2 Tax=Megasphaera RepID=S7J566_9FIRM
Selenium-dependent hydroxylase accessory protein YqeC {ECO:0000313|EMBL:EPP18990.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
selenium-dependent hydroxylase accessory protein YqeC
L2_059_256G1_scaffold_1159_14
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(11786..12595)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MZD6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF05173.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L2_059_256G1_scaffold_1159_15
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(12616..13347)
DNA (732bp) protein (244aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7HNM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP18988.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L2_059_256G1_scaffold_1159_16
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(13913..14797)
DNA (885bp) protein (295aa)
L-serine dehydratase n=2 Tax=Megasphaera RepID=S7HNU7_9FIRM
L-serine dehydratase {ECO:0000313|EMBL:EPP18987.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L-serine dehydratase
L2_059_256G1_scaffold_1159_17
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(14808..15467)
DNA (660bp) protein (220aa)
L-serine dehydratase n=2 Tax=Megasphaera RepID=G0VLD4_MEGEL
L-serine dehydratase
L-serine dehydratase {ECO:0000313|EMBL:CDF05176.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L2_059_256G1_scaffold_1159_18
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(15482..18430)
DNA (2949bp) protein (983aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
ATP-dependent helicase/nuclease subunit A n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VLD5_MEGEL
ATP-dependent helicase/nuclease subunit A
Displaying 18 items

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