ggKbase home page

L2_059_256G1_scaffold_411

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_411_1
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

849..2102
DNA (1254bp) protein (418aa)
Aminotransferase n=2 Tax=Megasphaera RepID=S7HIN7_9FIRM
Aminotransferase {ECO:0000313|EMBL:EPP15985.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
aminotransferase
L2_059_256G1_scaffold_411_2
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2126..2926
DNA (801bp) protein (267aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Pyrroline-5-carboxylate reductase n=2 Tax=Megasphaera RepID=S7HK32_9FIRM
pyrroline-5-carboxylate reductase
L2_059_256G1_scaffold_411_3
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3297..4895
DNA (1599bp) protein (533aa)
Transporter n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MYE1_9FIRM
Transporter {ECO:0000313|EMBL:CDF04828.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
transporter
L2_059_256G1_scaffold_411_4
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5355..6776
DNA (1422bp) protein (474aa)
Putative glycolate oxidase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VMP6_MEGEL
glycolate oxidase
Putative glycolate oxidase {ECO:0000313|EMBL:CCC74438.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_059_256G1_scaffold_411_5
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6884..8167
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Megasphaera sp. NM10 RepID=S7IWM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP15981.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L2_059_256G1_scaffold_411_6
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8275..9015
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7HIA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP15980.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L2_059_256G1_scaffold_411_7
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


9697..9909
DNA (213bp) protein (71aa)
50S ribosomal protein L31 n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MX01_9FIRM
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
50S ribosomal protein L31
L2_059_256G1_scaffold_411_8
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9982..10869
DNA (888bp) protein (296aa)
Membrane family protein n=2 Tax=Megasphaera RepID=S7J2R5_9FIRM
Membrane family protein {ECO:0000313|EMBL:EPP18216.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
membrane family protein
L2_059_256G1_scaffold_411_9
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10880..11968
DNA (1089bp) protein (363aa)
Peptide chain release factor 1 n=2 Tax=Megasphaera RepID=S7IZ50_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
peptide chain release factor 1
L2_059_256G1_scaffold_411_10
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11961..12818
DNA (858bp) protein (286aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Release factor glutamine methyltransferase n=2 Tax=Megasphaera RepID=S7HML4_9FIRM
protein-(Glutamine-N5) methyltransferase
L2_059_256G1_scaffold_411_11
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12825..13877
DNA (1053bp) protein (351aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VML8_MEGEL
sua5/YciO/YrdC/YwlC family protein
L2_059_256G1_scaffold_411_12
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13949..14389
DNA (441bp) protein (147aa)
Ribose-5-phosphate isomerase B n=3 Tax=Megasphaera RepID=G0VML7_MEGEL
ribose-5-phosphate isomerase B
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:CCC74409.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_059_256G1_scaffold_411_13
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14407..15030
DNA (624bp) protein (208aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Uracil phosphoribosyltransferase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VML6_MEGEL
uracil phosphoribosyltransferase
L2_059_256G1_scaffold_411_14
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15096..16031)
DNA (936bp) protein (312aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Homoserine O-succinyltransferase n=2 Tax=Megasphaera RepID=S7IZ52_9FIRM
homoserine O-succinyltransferase
L2_059_256G1_scaffold_411_15
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16060..17346)
DNA (1287bp) protein (429aa)
O-acetylhomoserine aminocarboxypropyltransferase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VML4_MEGEL
O-acetylhomoserine aminocarboxypropyltransferase
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:CCC74406.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_059_256G1_scaffold_411_16
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


18025..18465
DNA (441bp) protein (147aa)
50S ribosomal protein L13 n=2 Tax=Megasphaera RepID=S7HJ73_9FIRM
50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L2_059_256G1_scaffold_411_17
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


18488..18880
DNA (393bp) protein (131aa)
Ribosomal protein S9 n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UJV8_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
30S ribosomal protein S9
L2_059_256G1_scaffold_411_18
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19120..20205
DNA (1086bp) protein (362aa)
Iron-containing alcohol dehydrogenase n=2 Tax=Megasphaera RepID=S7HJ84_9FIRM
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:EPP15743.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
iron-containing alcohol dehydrogenase
L2_059_256G1_scaffold_411_19
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20241..22433
DNA (2193bp) protein (731aa)
Peptidase n=2 Tax=Megasphaera RepID=S7HJ70_9FIRM
Peptidase {ECO:0000313|EMBL:EPP15742.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
peptidase
L2_059_256G1_scaffold_411_20
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22451..24817
DNA (2367bp) protein (789aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Endonuclease MutS2 n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7N0U4_9FIRM
recombination and DNA strand exchange inhibitor protein
L2_059_256G1_scaffold_411_21
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25008..25646
DNA (639bp) protein (213aa)
Putative NAD-binding protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VMK4_MEGEL
NAD-binding protein
Putative NAD-binding protein {ECO:0000313|EMBL:CCC74396.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_059_256G1_scaffold_411_22
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25706..26290)
DNA (585bp) protein (195aa)
Flavin reductase {ECO:0000313|EMBL:ERT56539.1}; EC=1.7.-.- {ECO:0000313|EMBL:ERT56539.1};; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
Flavin reductase n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UCF6_9FIRM
iron-sulfur flavoprotein
L2_059_256G1_scaffold_411_23
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26317..27039)
DNA (723bp) protein (241aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
NAD-dependent protein deacetylase n=2 Tax=Megasphaera RepID=S7IVZ6_9FIRM
transcriptional regulator
L2_059_256G1_scaffold_411_24
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27057..27548)
DNA (492bp) protein (164aa)
HD domain protein n=2 Tax=Megasphaera RepID=S7HJ26_9FIRM
HD domain protein {ECO:0000313|EMBL:EPP16486.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
HD domain protein
L2_059_256G1_scaffold_411_25
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27719..29125
DNA (1407bp) protein (469aa)
Amino acid carrier protein n=2 Tax=Megasphaera RepID=S7HJ92_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EPP16487.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
amino acid carrier protein
L2_059_256G1_scaffold_411_26
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

29457..32252
DNA (2796bp) protein (932aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Isoleucine--tRNA ligase n=2 Tax=Megasphaera RepID=S7HJB6_9FIRM
isoleucyl-tRNA synthetase
L2_059_256G1_scaffold_411_27
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32455..33657
DNA (1203bp) protein (401aa)
Serine/threonine transporter SstT n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VPP5_MEGEL
serine/threonine transporter sstT
Serine/threonine transporter SstT {ECO:0000256|HAMAP-Rule:MF_01582, ECO:0000256|SAAS:SAAS00015301}; Na(+)/serine-threonine symporter {ECO:0000256|HAMAP-Rule:MF_01582}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_059_256G1_scaffold_411_28
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33735..34271)
DNA (537bp) protein (179aa)
UPI0003D6400E related cluster n=1 Tax=unknown RepID=UPI0003D6400E
Uncharacterized protein {ECO:0000313|EMBL:ETI96335.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
flavoredoxin
Displaying 28 items

View Taxonomy