name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L2_059_256G1_scaffold_307_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(1..276)
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Type I restriction modification DNA specificity domain protein (Fragment) n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CBL1_9CLOT
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:ERI81403.1}; Flags: Fragment;; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
type I restriction-modification system subunit S
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L2_059_256G1_scaffold_307_2
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(286..1209)
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Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HUK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO16574.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
ORF6N domain.
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L2_059_256G1_scaffold_307_3
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(1252..2733)
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Type I restriction-modification system methyltransferase subunit (EC:2.1.1.72)
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:CBK78467.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CBK78467.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Type I restriction-modification system methyltransferase subunit n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DL93_CLOSC
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L2_059_256G1_scaffold_307_4
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(2737..5109)
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Type I site-specific restriction-modification system, R (restriction) subunit and related helicases (EC:3.1.21.3)
Type I site-specific restriction-modification system, R (Restriction) subunit and related helicases {ECO:0000313|EMBL:CBK78468.1}; EC=3.1.21.3 {ECO:0000313|EMBL:CBK78468.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Type I site-specific restriction-modification system, R (Restriction) subunit and related helicases n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DL94_CLOSC
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L2_059_256G1_scaffold_307_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(5622..6605)
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Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJ62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77222.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
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L2_059_256G1_scaffold_307_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(6727..6966)
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Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJ61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77221.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
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L2_059_256G1_scaffold_307_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
7130..7732
|
DNA-binding helix-turn-helix protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJ60_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFB77220.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
toxin-antitoxin system
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L2_059_256G1_scaffold_307_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
7766..8860
|
Site-specific recombinase, phage integrase family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJ59_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFB77219.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
site-specific recombinase
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L2_059_256G1_scaffold_307_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(9099..9497)
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30S ribosomal protein S9 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIZ4_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
SSU ribosomal protein S9P
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L2_059_256G1_scaffold_307_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(9516..9947)
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50S ribosomal protein L13 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIZ3_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
LSU ribosomal protein L13P
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L2_059_256G1_scaffold_307_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(10320..10541)
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Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77501.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
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L2_059_256G1_scaffold_307_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(10960..13131)
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Tex-like protein N-terminal domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIZ0_9FIRM
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:EFB77499.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Transcriptional accessory protein
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L2_059_256G1_scaffold_307_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(13115..15547)
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Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77498.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Bacterial membrane protein YfhO.
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L2_059_256G1_scaffold_307_14
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
15576..16178
|
Predicted hydrolases of HD superfamily (EC:3.1.3.5)
HD domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIY8_9FIRM
HD domain protein {ECO:0000313|EMBL:EFB77497.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
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L2_059_256G1_scaffold_307_15
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(16215..17189)
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tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
tRNA-dihydrouridine synthase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIY7_9FIRM
tRNA-U20-dihydrouridine synthase
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L2_059_256G1_scaffold_307_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
17426..19948
|
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIY6_9FIRM
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L2_059_256G1_scaffold_307_17
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
20050..21087
|
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIY5_9FIRM
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L2_059_256G1_scaffold_307_18
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(21132..22010)
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Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77493.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
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L2_059_256G1_scaffold_307_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(22013..22843)
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Glycosyltransferase family 6 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIY3_9FIRM
Glycosyltransferase family 6 {ECO:0000313|EMBL:EFB77492.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
family 6 glycosyltransferase
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L2_059_256G1_scaffold_307_20
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(22843..24123)
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ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIY2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFB77491.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
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L2_059_256G1_scaffold_307_21
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(24136..24996)
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ABC-2 type transporter n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIY1_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
polysaccharide/polyol phosphate export systems, permease
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L2_059_256G1_scaffold_307_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(25011..27011)
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Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFB77489.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB77489.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIY0_9FIRM
glycosyltransferase-like protein
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L2_059_256G1_scaffold_307_23
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(27027..28007)
|
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFB77488.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB77488.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
glycosyltransferase, family 2 (EC:2.4.1.212)
Glycosyltransferase, group 2 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIX9_9FIRM
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L2_059_256G1_scaffold_307_24
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(28007..29110)
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Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77487.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
|
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L2_059_256G1_scaffold_307_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(29114..30175)
|
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFB77486.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB77486.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIX7_9FIRM
family 2 glycosyl transferase
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L2_059_256G1_scaffold_307_26
unknown
|
Not on your lists |
comp(30354..30980)
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This feature has no annotations |
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L2_059_256G1_scaffold_307_27
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(30977..31915)
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carbamoyl phosphate synthase-like protein (EC:6.3.5.5)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B4259F
Uncharacterized protein {ECO:0000313|EMBL:KGJ50134.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
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L2_059_256G1_scaffold_307_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(31919..32326)
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WxcM-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIX5_9FIRM
WxcM-like protein {ECO:0000313|EMBL:EFB77484.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
|
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L2_059_256G1_scaffold_307_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(32343..32975)
|
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77483.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
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L2_059_256G1_scaffold_307_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(32972..33787)
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Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFB77482.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB77482.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIX3_9FIRM
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