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L2_059_256G1_scaffold_629

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_256G1_scaffold_629_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..627)
DNA (627bp) protein (209aa)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EFB75071.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EFB75071.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
sulfide dehydrogenase (flavoprotein) subunit SudA (EC:1.97.-.- 1.4.1.14 1.4.1.13)
Glutamate synthase (NADPH), homotetrameric n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQE8_9FIRM
L2_059_256G1_scaffold_629_2
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(791..2740)
DNA (1950bp) protein (650aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNF6_9FIRM
Oxidoreductase {ECO:0000313|EMBL:KJF40947.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
L2_059_256G1_scaffold_629_3
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2753..3520)
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNF5_9FIRM
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KJF40948.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
3-oxoacyl-ACP reductase
L2_059_256G1_scaffold_629_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3537..4892)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IK49_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42470.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
NADH-flavin oxidoreductase
L2_059_256G1_scaffold_629_5
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4897..5727)
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HDX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF00322.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
AraC-type DNA-binding domain-containing proteins
L2_059_256G1_scaffold_629_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5765..7015)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IK05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42468.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
permease
L2_059_256G1_scaffold_629_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7026..8033)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J0H2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42467.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
amidohydrolase 2
L2_059_256G1_scaffold_629_8
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8440..9594)
DNA (1155bp) protein (385aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74350.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
putative dehydrogenase
L2_059_256G1_scaffold_629_9
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9613..12708)
DNA (3096bp) protein (1032aa)
alpha-mannosidase (EC:3.2.1.24)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPR8_9FIRM
Alpha-mannosidase {ECO:0000313|EMBL:KJF40588.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L2_059_256G1_scaffold_629_10
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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13052..14884
DNA (1833bp) protein (611aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74348.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
histidine kinase
L2_059_256G1_scaffold_629_11
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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14859..15902
DNA (1044bp) protein (348aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF40589.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
response regulator
L2_059_256G1_scaffold_629_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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16066..17427
DNA (1362bp) protein (454aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74346.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ABC transporter substrate-binding protein
L2_059_256G1_scaffold_629_13
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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17553..18476
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPR4_9FIRM
ABC transporter permease {ECO:0000313|EMBL:KJF40591.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
ABC transporter permease subunit
L2_059_256G1_scaffold_629_14
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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18483..19349
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74344.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
binding-protein-dependent transport system inner membrane protein
L2_059_256G1_scaffold_629_15
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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19382..21277
DNA (1896bp) protein (632aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF40592.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
glutaminase
L2_059_256G1_scaffold_629_16
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21443..22276
DNA (834bp) protein (278aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UDY5_RUMA7
xylose isomerase domain-containing protein
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:ADU21772.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L2_059_256G1_scaffold_629_17
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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22278..23327
DNA (1050bp) protein (350aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPR1_9FIRM
Oxidoreductase {ECO:0000313|EMBL:KJF40593.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
oxidoreductase
L2_059_256G1_scaffold_629_18
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23380..24294)
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74341.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Beta-xylosidase
L2_059_256G1_scaffold_629_19
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24308..25483)
DNA (1176bp) protein (392aa)
Oxidoreductase domain protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UDY4_RUMA7
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ADU21771.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L2_059_256G1_scaffold_629_20
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25485..26651)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IHC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49992.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
dehydrogenase
L2_059_256G1_scaffold_629_21

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26894..27169
DNA (276bp) protein (92aa)
Integrase family protein (Fragment) n=1 Tax=human gut metagenome RepID=K1S1L7_9ZZZZ
Integrase family protein {ECO:0000313|EMBL:EKC47580.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
integrase
Displaying 21 items

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