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L2_059_382G1_scaffold_2309

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_2309_1
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..2151
DNA (2151bp) protein (717aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=2 Tax=Alistipes RepID=I3YMY6_ALIFI
L2_059_382G1_scaffold_2309_2
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2727..3932)
DNA (1206bp) protein (402aa)
L-serine ammonia-lyase n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UNK0_9BACT
L-serine ammonia-lyase {ECO:0000313|EMBL:CCZ77319.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L-serine deaminase
L2_059_382G1_scaffold_2309_3
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4280..6928)
DNA (2649bp) protein (883aa)
Outer membrane protein transport protein, Ompp1/FadL/TodX family n=1 Tax=Alistipes sp. HGB5 RepID=E4M870_9BACT
Outer membrane protein transport protein, Ompp1/FadL/TodX family {ECO:0000313|EMBL:EFR58929.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
long-chain fatty acid transport protein
L2_059_382G1_scaffold_2309_4
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6960..7220)
DNA (261bp) protein (87aa)
Bacterial nucleoid DNA-binding protein n=2 Tax=Alistipes RepID=I3YMZ0_ALIFI
nucleoid DNA-binding protein
Bacterial nucleoid DNA-binding protein {ECO:0000313|EMBL:CCZ77322.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_382G1_scaffold_2309_5
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7562..8575)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4M867_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR58826.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L2_059_382G1_scaffold_2309_6
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9381..10301
DNA (921bp) protein (307aa)
transposase n=1 Tax=Alistipes sp. JC136 RepID=UPI0002885BCE
Uncharacterized protein {ECO:0000313|EMBL:EDO55676.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L2_059_382G1_scaffold_2309_7
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10719..11567
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9H9N7_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EOS00619.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
hypothetical protein
L2_059_382G1_scaffold_2309_8
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11749..12309
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4M866_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR58880.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L2_059_382G1_scaffold_2309_9
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12590..14557)
DNA (1968bp) protein (656aa)
DNA/RNA helicase, superfamily II n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YMZ1_ALIFI
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:AFL78359.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
DNA/RNA helicase
L2_059_382G1_scaffold_2309_10
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14740..15609
DNA (870bp) protein (290aa)
enoyl-ACP reductase (EC:1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=3 Tax=Alistipes RepID=I3YMZ2_ALIFI
Displaying 10 items

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