ggKbase home page

L2_059_382G1_scaffold_1379

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_1379_1
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..934)
DNA (933bp) protein (311aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=3 Tax=Alistipes RepID=I3YNT7_ALIFI
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Response regulator with CheY-like receiver AAA-type ATPase and DNA-binding domains {ECO:0000313|EMBL:CCZ76765.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_382G1_scaffold_1379_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1410..1682
DNA (273bp) protein (91aa)
Bacterial nucleoid DNA-binding protein n=4 Tax=Alistipes RepID=I3YNT8_ALIFI
nucleoid DNA-binding protein
Bacterial nucleoid DNA-binding protein {ECO:0000313|EMBL:CDD24927.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L2_059_382G1_scaffold_1379_3
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1718..1807
DNA (90bp) protein (30aa)
Uncharacterized protein n=6 Tax=Alistipes RepID=I3YNT9_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ76763.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_382G1_scaffold_1379_4
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2167..3717
DNA (1551bp) protein (517aa)
Ribonuclease Rne/Rng family n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5V7S2_9BACT
Ribonuclease Rne/Rng family {ECO:0000313|EMBL:CCZ76762.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
ribonuclease, Rne/Rng family
L2_059_382G1_scaffold_1379_5
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3722..7048
DNA (3327bp) protein (1109aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Transcription-repair-coupling factor n=1 Tax=Alistipes sp. HGB5 RepID=E4M7E5_9BACT
transcription-repair coupling factor Mfd
L2_059_382G1_scaffold_1379_6
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7045..7785
DNA (741bp) protein (247aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Type III pantothenate kinase n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UFE0_9BACT
pantothenate kinase, type III
L2_059_382G1_scaffold_1379_7
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7760..9133
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YNU3_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL78661.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_059_382G1_scaffold_1379_8
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9249..10583
DNA (1335bp) protein (445aa)
Tetratricopeptide repeat protein n=1 Tax=Alistipes sp. HGB5 RepID=E4M7E2_9BACT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFR59165.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L2_059_382G1_scaffold_1379_9
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10587..11462
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UM02_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ76744.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
cell division protein
L2_059_382G1_scaffold_1379_10
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11466..12728
DNA (1263bp) protein (421aa)
CBS domain-containing protein n=2 Tax=Alistipes RepID=I3YNU6_ALIFI
hypothetical protein
CBS domain-containing protein {ECO:0000313|EMBL:AFL78664.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_059_382G1_scaffold_1379_11
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12819..14852
DNA (2034bp) protein (678aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
PPIC-type PPIASE family protein n=3 Tax=Alistipes RepID=I3YNU7_ALIFI
PPIC-type PPIASE family protein
L2_059_382G1_scaffold_1379_12
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14957..16099
DNA (1143bp) protein (381aa)
Fe-dependent oxidoreductase, alcohol dehydrogenase n=2 Tax=Alistipes RepID=I3YNU8_ALIFI
Fe-dependent oxidoreductase, alcohol dehydrogenase
Fe-dependent oxidoreductase alcohol dehydrogenase {ECO:0000313|EMBL:CCZ76741.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_382G1_scaffold_1379_13
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16373..17050)
DNA (678bp) protein (226aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EFR59148.1}; EC=5.4.99.2 {ECO:0000313|EMBL:EFR59148.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Methylmalonyl-CoA mutase n=3 Tax=Alistipes RepID=I3YNU9_ALIFI
methylmalonyl-CoA mutase
L2_059_382G1_scaffold_1379_14
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17011..18285)
DNA (1275bp) protein (425aa)
Methylmalonyl-CoA mutase n=3 Tax=Alistipes RepID=I3YNU9_ALIFI
methylmalonyl-CoA mutase
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:AFL78667.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_059_382G1_scaffold_1379_15
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18288..20138)
DNA (1851bp) protein (617aa)
Methylmalonyl-CoA mutase, N-terminal domain/subunit n=2 Tax=Alistipes RepID=I3YNV0_ALIFI
Methylmalonyl-CoA mutase, N-terminal domain/subunit {ECO:0000313|EMBL:AFL78668.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
methylmalonyl-CoA mutase, N-terminal domain/subunit
L2_059_382G1_scaffold_1379_16
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20743..22899
DNA (2157bp) protein (719aa)
Glutamine synthetase n=2 Tax=Alistipes RepID=I3YNV1_ALIFI
Glutamine synthetase {ECO:0000313|EMBL:AFL78669.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
glutamine synthetase
L2_059_382G1_scaffold_1379_17
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23031..23363
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=E4M7D4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ76699.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L2_059_382G1_scaffold_1379_18
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23662..24324
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5V7K7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ76697.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_382G1_scaffold_1379_19
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24349..25197
DNA (849bp) protein (283aa)
Putative N-acetylglucosamine kinase n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5V012_9BACT
Putative N-acetylglucosamine kinase {ECO:0000313|EMBL:CCZ76696.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
N-acetylglucosamine kinase
L2_059_382G1_scaffold_1379_20
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25160..25975
DNA (816bp) protein (272aa)
Putative N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UF90_9BACT
Putative N-acetylmuramic acid 6-phosphate etherase {ECO:0000313|EMBL:CCZ76695.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
sugar phosphate isomerase
L2_059_382G1_scaffold_1379_21
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25956..27767
DNA (1812bp) protein (604aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
3-octaprenyl-4hydroxybenzoate decarboxylase n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5ULV3_9BACT
3-octaprenyl-4hydroxybenzoate decarboxylase {ECO:0000313|EMBL:CCZ76694.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_382G1_scaffold_1379_22
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27809..28864
DNA (1056bp) protein (352aa)
Competence protein ComEA helix-hairpin-helix repeat region n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UEL0_9BACT
Competence protein ComEA helix-hairpin-helix repeat region {ECO:0000313|EMBL:CCZ76693.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
DNA uptake protein and related DNA-binding proteins
L2_059_382G1_scaffold_1379_23
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28964..29155
DNA (192bp) protein (64aa)
30S ribosomal protein S21 n=3 Tax=Alistipes RepID=I3YNV8_ALIFI
30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_382G1_scaffold_1379_24
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29577..32252)
DNA (2676bp) protein (892aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Alistipes RepID=E4M7C6_9BACT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CCZ76691.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
signal transduction histidine kinase
L2_059_382G1_scaffold_1379_25
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32352..33203)
DNA (852bp) protein (284aa)
Transposase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YMB9_ALIFI
transposase
Transposase {ECO:0000313|EMBL:AFL78137.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Displaying 25 items

View Taxonomy