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L2_059_382G1_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 283 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_1_1
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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316..825
DNA (510bp) protein (170aa)
SNARE-like domain protein n=2 Tax=Clostridiales RepID=B0NCP4_CLOSV
SNARE-like domain protein {ECO:0000313|EMBL:EDS07745.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
DedA family protein
L2_059_382G1_scaffold_1_2
unknown

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869..985
DNA (117bp) protein (39aa)

This feature has no annotations

L2_059_382G1_scaffold_1_3
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1078..1785
DNA (708bp) protein (236aa)
Response regulator receiver domain protein n=2 Tax=Clostridiales RepID=B0NCP7_CLOSV
Response regulator receiver domain protein {ECO:0000313|EMBL:EDS07748.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
winged helix family two component transcriptional regulator
L2_059_382G1_scaffold_1_4
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1757..3838
DNA (2082bp) protein (694aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39609.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
integral membrane sensor signal transduction histidine kinase
L2_059_382G1_scaffold_1_5
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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4060..4629
DNA (570bp) protein (190aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MJH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71254.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L2_059_382G1_scaffold_1_6
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4635..5282
DNA (648bp) protein (216aa)
Response regulator receiver domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BWL4_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEG75696.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
two component transcriptional regulator
L2_059_382G1_scaffold_1_7
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5284..6393
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MU08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71252.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
histidine kinase
L2_059_382G1_scaffold_1_8
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6614..7654
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003749105
DctP family TRAP transporter solute receptor {ECO:0000313|EMBL:EMZ12457.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
C4-dicarboxylate ABC transporter, substrate-binding protein
L2_059_382G1_scaffold_1_9
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7671..8150
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000377CA38
Uncharacterized protein {ECO:0000313|EMBL:EMZ12459.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
C4-dicarboxylate ABC transporter, permease protein
L2_059_382G1_scaffold_1_10
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8150..9433
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037A020D
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EMZ12460.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
TRAP transporter, DctM subunit/tripartite ATP-independent periplasmic transporter solute receptor, DctP family
L2_059_382G1_scaffold_1_11
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9452..10300
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003715CEE
Transketolase {ECO:0000313|EMBL:EMZ12461.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
transketolase, thiamine diphosphate binding domain (N-terminal subunit)
L2_059_382G1_scaffold_1_12
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10329..11264
DNA (936bp) protein (312aa)
transketolase n=1 Tax=Blautia producta RepID=UPI0003717399
Transketolase {ECO:0000313|EMBL:EMZ12462.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
transketolase, pyrimidine binding domain (C-terminal subunit)
L2_059_382G1_scaffold_1_13
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11293..12051
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003707E68
Uncharacterized protein {ECO:0000313|EMBL:EMZ12463.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
short chain dehydrogenase
L2_059_382G1_scaffold_1_14
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

12158..12886
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003628735
Uncharacterized protein {ECO:0000313|EMBL:CDC93473.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
Regulatory protein GntR HTH
L2_059_382G1_scaffold_1_15
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12990..13418
DNA (429bp) protein (143aa)
ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose 5-phosphate isomerase B n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NLH8_9FIRM
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:CDC09219.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
L2_059_382G1_scaffold_1_16
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13422..14657
DNA (1236bp) protein (412aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Blautia sp. CAG:237 RepID=R6LVM2_9FIRM
L2_059_382G1_scaffold_1_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14683..15618
DNA (936bp) protein (312aa)
fructose-bisphosphate aldolase n=1 Tax=Blautia producta RepID=UPI00036FCB9C
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:EGB94507.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Fba; fructose/tagatose bisphosphate aldolase
L2_059_382G1_scaffold_1_18
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16003..16716
DNA (714bp) protein (238aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=2 Tax=Clostridiales RepID=B0NCP9_CLOSV
L2_059_382G1_scaffold_1_19
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16703..18109
DNA (1407bp) protein (469aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQQ7_9FIRM
L2_059_382G1_scaffold_1_20
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18094..18540
DNA (447bp) protein (149aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Mini-ribonuclease 3 n=2 Tax=Clostridiales RepID=B0NCQ1_CLOSV
hypothetical protein
L2_059_382G1_scaffold_1_21
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18553..19305
DNA (753bp) protein (251aa)
rRNA methylase, putative, group 3 (EC:2.1.1.-)
RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridiales RepID=B0NCQ2_CLOSV
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EDS07753.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L2_059_382G1_scaffold_1_22
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19334..19945
DNA (612bp) protein (204aa)
RNA polymerase factor sigma-70 n=2 Tax=Clostridiales RepID=B0NCQ3_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39604.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
RNA polymerase, sigma 30 subunit, SigH
L2_059_382G1_scaffold_1_23
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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20201..21181
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C933_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS72093.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
L2_059_382G1_scaffold_1_24
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21218..22573
DNA (1356bp) protein (452aa)
MATE efflux family protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BX52_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EEG75460.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
putative efflux protein, MATE family
L2_059_382G1_scaffold_1_25
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22596..23294
DNA (699bp) protein (233aa)
Hydrolase, NUDIX family n=1 Tax=Clostridium sp. D5 RepID=F0Z101_9CLOT
Hydrolase, NUDIX family {ECO:0000313|EMBL:EGB92103.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ADP-ribose pyrophosphatase
L2_059_382G1_scaffold_1_26
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23365..25032
DNA (1668bp) protein (556aa)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=2 Tax=Clostridiales RepID=B0NCQ7_CLOSV
L2_059_382G1_scaffold_1_27
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25041..26438
DNA (1398bp) protein (466aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39599.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
L2_059_382G1_scaffold_1_28
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26501..26812)
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NCQ9_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39598.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L2_059_382G1_scaffold_1_29
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26978..28540
DNA (1563bp) protein (521aa)
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Phospholipase D domain protein n=2 Tax=Clostridiales RepID=B0NCR1_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39597.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L2_059_382G1_scaffold_1_30
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28608..29150)
DNA (543bp) protein (181aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NCR2_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39596.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
Displaying items 1-30 of 283 in total

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