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L2_059_382G1_scaffold_23

Search features with annotation key words

Displaying items 1-30 of 143 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_23_1
unknown

Not on your lists

comp(91..288)
DNA (198bp) protein (66aa)

This feature has no annotations

L2_059_382G1_scaffold_23_2
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(834..1415)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KF82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35839.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
transcriptional regulator, TetR family
L2_059_382G1_scaffold_23_3
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1617..2615
DNA (999bp) protein (333aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KP91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32731.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
NAD-dependent epimerase/dehydratase
L2_059_382G1_scaffold_23_4
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(2718..3512)
DNA (795bp) protein (265aa)
Putative xylose isomerase domain protein TIM barrel n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5Y893_TREAZ
putative xylose isomerase domain-containing protein
Putative xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:AEF82806.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
L2_059_382G1_scaffold_23_5
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3566..4378)
DNA (813bp) protein (271aa)
Putative sugar phosphate isomerase/epimerase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T6Z8_9CLOT
Putative sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:CCZ61635.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
sugar phosphate isomerase/epimerase
L2_059_382G1_scaffold_23_6
Bacillus hemicellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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4497..5294
DNA (798bp) protein (266aa)
Transcriptional regulator (AraC/XylS family) protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BEU0_9BACI
Transcriptional regulator {ECO:0000313|EMBL:GAE29800.1}; TaxID=1236971 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus hemicellulosilyticus JCM 9152.;"
AraC family transcriptional regulator
L2_059_382G1_scaffold_23_7
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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5572..7170
DNA (1599bp) protein (533aa)
Carbohydrate kinase FGGY n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6V3G5_9FIRM
Carbohydrate kinase FGGY {ECO:0000313|EMBL:CDC92698.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
Sugar (pentulose and hexulose) kinases
L2_059_382G1_scaffold_23_8
unknown

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7223..7387
DNA (165bp) protein (55aa)

This feature has no annotations

L2_059_382G1_scaffold_23_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7453..8157)
DNA (705bp) protein (235aa)
Class II Aldolase and Adducin N-terminal domain protein n=2 Tax=Clostridium sordellii RepID=T0CEZ2_CLOSO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83221.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_059_382G1_scaffold_23_10
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(8177..9970)
DNA (1794bp) protein (598aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
L-fucose isomerase (EC:5.3.1.25)
fucose isomerase n=1 Tax=Megamonas rupellensis RepID=UPI0003751F22
L2_059_382G1_scaffold_23_11
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10266..10862)
DNA (597bp) protein (199aa)
CotJC n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037F8B61
Manganese containing catalase {ECO:0000313|EMBL:CDC38014.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
cotJC; Spore coat protein JC
L2_059_382G1_scaffold_23_12
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10862..11116)
DNA (255bp) protein (85aa)
Protein CotJB n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AD68_9CLOT
Protein CotJB {ECO:0000313|EMBL:CCX37331.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L2_059_382G1_scaffold_23_13
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11113..11313)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A896_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37332.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L2_059_382G1_scaffold_23_14
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11405..13120)
DNA (1716bp) protein (572aa)
Cadherin-like beta sandwich domain protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6U0_9CLOT
Cadherin-like beta sandwich domain protein {ECO:0000313|EMBL:CCX36752.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
cell wall binding repeat-containing protein
L2_059_382G1_scaffold_23_15
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13117..13389)
DNA (273bp) protein (91aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VZC1_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDO59899.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Helix-turn-helix.
L2_059_382G1_scaffold_23_16
Clostridium sp. CAG:567, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13868..15085
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:567 RepID=R7M6Z8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE96819.1}; TaxID=1262820 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:567.;"
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
L2_059_382G1_scaffold_23_17
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15093..16247
DNA (1155bp) protein (385aa)
Glycosyl/glycerophosphate transferase teichoic acid biosynthesis n=1 Tax=Clostridium sp. CAG:217 RepID=R6JLJ3_9CLOT
Glycosyl/glycerophosphate transferase teichoic acid biosynthesis {ECO:0000313|EMBL:CDB50887.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
glycosyl/glycerophosphate transferase, teichoic acid biosynthesis
L2_059_382G1_scaffold_23_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16244..18706
DNA (2463bp) protein (821aa)
Glycosyl transferases group 1 family protein n=1 Tax=Clostridium difficile F501 RepID=T4AWR1_CLODI
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:EQI01216.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
L2_059_382G1_scaffold_23_19
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

18765..19172
DNA (408bp) protein (136aa)
glycerol-3-phosphate cytidylyltransferase (EC:2.7.7.39)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QIR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD65182.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
L2_059_382G1_scaffold_23_20
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19261..19731
DNA (471bp) protein (157aa)
CrtK protein n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5VKW3_9FIRM
CrtK protein {ECO:0000313|EMBL:CCZ84166.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
tryptophan-rich sensory protein
L2_059_382G1_scaffold_23_21
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19808..20287)
DNA (480bp) protein (160aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z484_9CLOT
ybaK/ebsC protein
L2_059_382G1_scaffold_23_22
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(20284..20880)
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Paenibacillus RepID=F5LJ83_9BACL
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
L2_059_382G1_scaffold_23_23
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21118..21735
DNA (618bp) protein (206aa)
Nucleotidyltransferase domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCY2_9FIRM
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:EDS10668.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
nucleotidyltransferase family protein
L2_059_382G1_scaffold_23_24
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21817..23232)
DNA (1416bp) protein (472aa)
sulfide dehydrogenase (flavoprotein) subunit SudA (EC:1.97.-.- 1.4.1.13 1.4.1.14)
Sulfide dehydrogenase (Flavoprotein) subunit SudA n=1 Tax=Clostridium sp. CAG:964 RepID=R6U360_9CLOT
Sulfide dehydrogenase (Flavoprotein) subunit SudA {ECO:0000313|EMBL:CDC80138.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
L2_059_382G1_scaffold_23_25
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23235..24074)
DNA (840bp) protein (280aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.18.1.2 1.97.-.-)
Sulfide dehydrogenase (Flavoprotein) subunit SudB n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MTN6_9FIRM
Sulfide dehydrogenase (Flavoprotein) subunit SudB {ECO:0000313|EMBL:CDC03068.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L2_059_382G1_scaffold_23_26
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24310..25527)
DNA (1218bp) protein (406aa)
Alcohol dehydrogenase class IV n=1 Tax=Roseburia sp. CAG:45 RepID=R6P3A3_9FIRM
Alcohol dehydrogenase class IV {ECO:0000313|EMBL:CDC12946.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Alcohol dehydrogenase, class IV
L2_059_382G1_scaffold_23_27
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25934..26677)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B8P8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD61289.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L2_059_382G1_scaffold_23_28
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

26910..27620
DNA (711bp) protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YFU6_9FIRM
L2_059_382G1_scaffold_23_29
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27693..28247
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=1 Tax=Clostridium sp. CAG:352 RepID=R6QX86_9CLOT
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
ribosome recycling factor
L2_059_382G1_scaffold_23_30
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

28292..29017
DNA (726bp) protein (242aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
uppS; Isoprenyl transferase (EC:2.5.1.-)
Isoprenyl transferase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZIC9_9FIRM
Displaying items 1-30 of 143 in total

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