ggKbase home page

L2_059_382G1_scaffold_35

Search features with annotation key words

Displaying items 1-30 of 197 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_35_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(140..556)
DNA (417bp) protein (139aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Endoribonuclease YbeY n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ECT4_9BACE
hypothetical protein
L2_059_382G1_scaffold_35_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(570..1385)
DNA (816bp) protein (272aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PN54_9BACE
DNA modification methylase
L2_059_382G1_scaffold_35_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1392..2690)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UXK9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17757.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_059_382G1_scaffold_35_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2683..3489)
DNA (807bp) protein (269aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
DNA adenine methylase (dam) (EC:2.1.1.72)
DNA adenine methylase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PMP3_9BACE
L2_059_382G1_scaffold_35_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3588..4820)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UU91_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17755.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Uncharacterized membrane protein, required for spore maturation in B.subtilis.
L2_059_382G1_scaffold_35_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5166..6197
DNA (1032bp) protein (344aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Holliday junction ATP-dependent DNA helicase RuvB n=3 Tax=Bacteroides RepID=A5ZF17_9BACE
Holliday junction DNA helicase subunit RuvB
L2_059_382G1_scaffold_35_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6325..6765
DNA (441bp) protein (147aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZF18_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17753.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_059_382G1_scaffold_35_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6818..8314
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UXK5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17752.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L2_059_382G1_scaffold_35_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8318..9673
DNA (1356bp) protein (452aa)
Hydrophobic domain protein n=3 Tax=Bacteroides RepID=A5ZF20_9BACE
Hydrophobic domain protein {ECO:0000313|EMBL:EDM21536.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Predicted membrane protein
L2_059_382G1_scaffold_35_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9693..11831
DNA (2139bp) protein (713aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UU86_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17750.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_059_382G1_scaffold_35_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12011..13933)
DNA (1923bp) protein (641aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ECS2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17749.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Superfamily II DNA and RNA helicases
L2_059_382G1_scaffold_35_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14043..14963)
DNA (921bp) protein (307aa)
Kinase, PfkB family n=3 Tax=Bacteroides RepID=A5ZF23_9BACE
Kinase, PfkB family {ECO:0000313|EMBL:EDM21539.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
fructokinase
L2_059_382G1_scaffold_35_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14951..15556)
DNA (606bp) protein (202aa)
Predicted sugar phosphate isomerase involved in capsule formation (EC:5.3.1.13)
SIS domain protein n=3 Tax=Bacteroides RepID=A5ZF24_9BACE
KpsF/GutQ family sugar isomerase {ECO:0000313|EMBL:EIY17747.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L2_059_382G1_scaffold_35_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15561..16094)
DNA (534bp) protein (178aa)
TIGR00730 family protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PMN5_9BACE
TIGR00730 family protein {ECO:0000313|EMBL:EIY17746.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
conserved hypothetical protein, DprA/Smf-related, family 2
L2_059_382G1_scaffold_35_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16200..17420
DNA (1221bp) protein (407aa)
Peptidase M16 inactive domain protein n=3 Tax=Bacteroides RepID=A5ZF26_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73446.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Predicted Zn-dependent peptidases
L2_059_382G1_scaffold_35_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17635..18906)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZF27_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73445.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_059_382G1_scaffold_35_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18922..20223)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PN46_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17743.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
glycosyl hydrolase family 88
L2_059_382G1_scaffold_35_18
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20560..23748
DNA (3189bp) protein (1063aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroides RepID=A5ZF29_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CCZ73443.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_059_382G1_scaffold_35_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23758..25692
DNA (1935bp) protein (645aa)
SusD family protein n=3 Tax=Bacteroides RepID=A5ZF30_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73442.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RagB/SusD domain protein
L2_059_382G1_scaffold_35_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25773..28604
DNA (2832bp) protein (944aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UU77_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17740.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative lipoprotein
L2_059_382G1_scaffold_35_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28714..30246
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ECR1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17739.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_059_382G1_scaffold_35_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30332..32140
DNA (1809bp) protein (603aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PN40_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17738.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
heparinase II/III family protein
L2_059_382G1_scaffold_35_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32173..33717
DNA (1545bp) protein (515aa)
Alpha-N-acetylgalactosaminidase (EC:3.2.1.49)
Glycosyl hydrolase family 109 protein 5 n=3 Tax=Bacteroides RepID=I8UXI9_9BACE
Glycosyl hydrolase family 109 protein 5 {ECO:0000313|EMBL:EIY17737.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L2_059_382G1_scaffold_35_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33803..37816)
DNA (4014bp) protein (1338aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PMM5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17736.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
histidine kinase
L2_059_382G1_scaffold_35_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38183..38812)
DNA (630bp) protein (210aa)
WbqC-like protein n=3 Tax=Bacteroides RepID=A5ZF36_9BACE
WbqC-like protein {ECO:0000313|EMBL:CCZ73434.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
WbqC-like protein family.
L2_059_382G1_scaffold_35_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38883..39821)
DNA (939bp) protein (313aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ECQ5_9BACE
L2_059_382G1_scaffold_35_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39838..41322)
DNA (1485bp) protein (495aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I n=3 Tax=Bacteroides RepID=A5ZF38_9BACE
L2_059_382G1_scaffold_35_28
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41347..42111)
DNA (765bp) protein (255aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
Dihydrodipicolinate reductase n=3 Tax=Bacteroides RepID=A5ZF39_9BACE
L2_059_382G1_scaffold_35_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42180..43220
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PMM0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17731.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Protein of unknown function (DUF2851).
L2_059_382G1_scaffold_35_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43228..45849)
DNA (2622bp) protein (874aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UU70_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17730.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
thioredoxin
Displaying items 1-30 of 197 in total

View Taxonomy